Gene PSPA7_3847 details

Gene Information

• Locus tag: PSPA7_3847
• Symbol: ccmF
• ID: 5357457
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: -
• Start bp: 3982427
• End bp: 3984400
• Gene Length: 1974 bp
• Protein Length: 657 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 640812897
• Product: cytochrome c-type biogenesis protein CcmF
• Protein accession: YP_001349201
• Protein GI: 152987823
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1138] Cytochrome c biogenesis factor
• TIGRFAM ID: [TIGR00353] c-type cytochrome biogenesis protein CcmF

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTCCCG AACTCGGCCA CCTGGCCCTG ATCCTCGCCC TCTGCCTGGC CCTGGTGCAG 
TCCAGCCTGC CGCTGGTCGG CGCCTGGCGC GGCGATCGCC AGTGGATGAG CCTGGCGCGC 
CCGGCGGCCT GGGGACAGTT CGCCTTCCTC GCCTTCGCCT TCGGCTGCCT GACCTGGGCC 
TTCCTGCGCG ATGACTTCTC GGTGGCCTAC GTCGCCGGCA ACTCCAACAG CGCGCTGCCC 
TGGTACTACA AGTTCAGCGC CGTCTGGGGC GCCCATGAAG GCTCGCTGCT GCTCTGGGCG 
CTGATCCTCG GCGGCTGGAC CTTCGCCGTG TCGATCTTCT CCCGGCAACT GCCGGAGGTG 
ATGCTGGCCC GCGTGCTGGC GGTGATGGGG ATGATCAGCA CCGGCTTCCT GCTGTTCCTG 
ATCGTCACTT CCAACCCCTT CAGCCGCCTG CTGCCGCAGA CGCCGATGGA CGGCAACGAC 
CTCAACCCGC TGCTGCAGGA CGTCGGCCTG ATCGTCCATC CGCCGATGCT CTACATGGGC 
TACGTCGGCT TCTCGGTGGC CTTCGCCTTC GCCATCGCCG CGCTGCTCGG CGGCCGCCTC 
GACGCCGCCT GGGCGCGCTG GTCGCGGCCC TGGACCCTGG TGGCCTGGGC CTTCCTCGGC 
GTCGGCATCG TGCTCGGTTC CTGGTGGGCC TACTACGAAC TCGGTTGGGG CGGCTGGTGG 
TTCTGGGATC CGGTGGAGAA CGCCTCGTTC ATGCCCTGGC TGGTCGGCAC CGCGCTGATC 
CACTCGCTGG CGGTGACCGA GAAGCGCGGC GTGTTCAAGA GCTGGACCGT GCTGCTGGCG 
ATCGCCGCCT TCTCCCTGAG CCTGCTGGGC ACCTTCCTGG TCCGCTCCGG GGTGCTCACC 
TCGGTGCACG CCTTCGCCTC CGACCCGGAG CGCGGGGTGT TCATCCTGGC CTTCCTGTTG 
CTGGTGGTCG GCGGCTCGCT GACCCTGTTC GCCCTGCGCG CGCCGGTGGT CAAGAGCCAG 
GTCGGCTTCG CCCTGTGGTC GCGCGAGACC CTGCTGCTGC TGAACAACCT GGTGCTGGTG 
GTGGCGGCCT CGATGATCCT CCTCGGGACC GTCTACCCGC TGCTGCTCGA CGCACTCAGC 
GGCGCCAAGC TGTCGGTCGG CCCGCCGTAC TTCAACGCCA TGTTCCTGCC GCTGATGGCT 
GCGCTGATGG CGGCCCTGGC GGTCGGTGTG CTGGTGCGCT GGAAGGACAC CCCGAGCCGC 
TGGCTGCTCG GCATGCTGAC CCCGGTGCTG GTGGTCAGCG CGGTACTCGC GGCGGCCGGC 
TCGATGCTCT TCGGCGACTT CAACTGGGCG GTGCTGGCGG TGTTCCTGCT GTCCGCCTGG 
GTGGTCCTGG CCGGCTTCCG CGACTTCCTC GACAAGACCC GCCACAAGGG CGTGCTGGCC 
GGTGCCCGCA GCCTGAGCCG CAGCTACTGG GGCATGCAGT TGGCGCACCT GGGCATCGCC 
GTGTGCGCCA TCGGCATCGT CCTCAGCAGC CAGTACAGCG CCCAGCGTGA CCTGCGCATG 
TCGCCCGGCG ACACCGTCGA ACTGGGCGGC TACCACTTCC TCTTCGACGG CGCGAAGCAC 
CACGAAGGGC CGAACTACAC CTCGGACAAG GGCAGCATCC ACGTCAGCCG CGACGGCAAG 
GAGATCGCCA CCCTGCATCC GGAGAAGCGC CTGTACACCG TGCAGAGCTC GATGATGACC 
GAGGCCGGGA TCGACGCCGG CTTCACCCGC GACCTCTACG TGGCGCTCGG CGAGCCGCTG 
GAGAACGGCG CCTGGGCGGT GCGCGTGCAC GTCAAGCCGT TCGTCCGCTG GATCTGGTTC 
GGTGGCCTGC TGATGGGCCT GGGCGGCGCA CTGGCGGCGC TCGATCGGCG CTACCGGGTG 
AAGGTGAAAA CACGTGTGCG CGAGGCCCTG GGCCTCGCCG GTCAGGGAGC CTGA 

 

Protein sequence

MIPELGHLAL ILALCLALVQ SSLPLVGAWR GDRQWMSLAR PAAWGQFAFL AFAFGCLTWA 
FLRDDFSVAY VAGNSNSALP WYYKFSAVWG AHEGSLLLWA LILGGWTFAV SIFSRQLPEV 
MLARVLAVMG MISTGFLLFL IVTSNPFSRL LPQTPMDGND LNPLLQDVGL IVHPPMLYMG 
YVGFSVAFAF AIAALLGGRL DAAWARWSRP WTLVAWAFLG VGIVLGSWWA YYELGWGGWW 
FWDPVENASF MPWLVGTALI HSLAVTEKRG VFKSWTVLLA IAAFSLSLLG TFLVRSGVLT 
SVHAFASDPE RGVFILAFLL LVVGGSLTLF ALRAPVVKSQ VGFALWSRET LLLLNNLVLV 
VAASMILLGT VYPLLLDALS GAKLSVGPPY FNAMFLPLMA ALMAALAVGV LVRWKDTPSR 
WLLGMLTPVL VVSAVLAAAG SMLFGDFNWA VLAVFLLSAW VVLAGFRDFL DKTRHKGVLA 
GARSLSRSYW GMQLAHLGIA VCAIGIVLSS QYSAQRDLRM SPGDTVELGG YHFLFDGAKH 
HEGPNYTSDK GSIHVSRDGK EIATLHPEKR LYTVQSSMMT EAGIDAGFTR DLYVALGEPL 
ENGAWAVRVH VKPFVRWIWF GGLLMGLGGA LAALDRRYRV KVKTRVREAL GLAGQGA