| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3840 |
|---|
| Symbol | |
|---|
| ID | 5359195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 3976270 |
|---|
| End bp | 3977370 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640812890 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001349194 |
|---|
| Protein GI | 152987710 |
|---|
| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3191] L-aminopeptidase/D-esterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCTC GACAACTTGG CATCACCCTC GGCCTGGGCA CTCCCGGCCC GTTCAACGCG
ATCACCGACG TTCCCGGCGT GCGCGTCGGC CACAGCACCC TGAACCAGCG GAGCGACGGC
AGGCAGGTTC GCACCGGCGT CACCCTGGTC CAGCCGCGCG CCGGTGCGGC GCGCCTGCAA
CCCTGCTTCG CCGGCTGCCA TGTGCTCAAC GGCAACGGTG ACGCCACCGG CCTGGAGTGG
ATCCGCGAGG CCGGCCTGCT GACCACCCCG ATCGCCATCA CCAATACCCA CAGCGTCGGC
GCGGTGCGCG ACGCGCTGAT CGCCGAGGAG CGCGCCGAAC TCGGCGACAG CGGGCTGTAC
TGGTGCATGC CGGTGGTGAT GGAAACCTTC GATGGCCTGC TCAACGACAT CTGGGGCCAG
CACGTCGGCG CCCGCCAGGT CGGTGAGGCG CTGGCCTGCG CCGAGTCCGG ACCGGTCCGC
GAAGGTTCGG TGGGCGGCGG CACCGGGATG ATCTGCCACG AGTTCAAGGG CGGCATCGGC
AGCGCCTCGC GGCGACTGCC GGCGGAGCAG GGCGGCTGGA CGGTGGGCGC GCTGGTCCAG
GCCAACCACG GCCAGCGCCG CGAGCTACGG GTCGATGGCT ACCCGGTCGG CCGCCGACTG
GGCGAGATCC CCTCGCCGTT CCGCGAGGAA GGCACCCCGG GCATGGGCTC CATCGTGGTG
ATCCTGGCCA CCGACGCGCC GCTGTTGCCG CACCAGTGCC AGCGCCTGGC GCAGCGCGCC
TCGATCGGCA TCGCTCGCAC CGGTGGCGGC ACCGAGGACT CCAGCGGCGA CGTGTTCCTC
GCCTTCGCCA CCGGCAACCA GGATCTGCCG CCAGCCGACT ATGCGCGCAA GGAACTGCCG
CAGAGCACGC CGCTACGGAT GCTCAACAAC GATCACATCT CGCCGCTGTT CGCCGCGGCG
GCGGAGGCGG TGGAAGAAGC CATCGTCAAC GTGCTGTTGG CCGGCGAGGA CATGCGCACC
GAGGACGGCC GGCTGGTCCC CGCGCTGAAG GGGGAGACGC TCCTGGCGGC GCTGCGCGAG
ACCGGCTGGC CAGGGCGCTG A
|
|---|
| Protein sequence | MRARQLGITL GLGTPGPFNA ITDVPGVRVG HSTLNQRSDG RQVRTGVTLV QPRAGAARLQ
PCFAGCHVLN GNGDATGLEW IREAGLLTTP IAITNTHSVG AVRDALIAEE RAELGDSGLY
WCMPVVMETF DGLLNDIWGQ HVGARQVGEA LACAESGPVR EGSVGGGTGM ICHEFKGGIG
SASRRLPAEQ GGWTVGALVQ ANHGQRRELR VDGYPVGRRL GEIPSPFREE GTPGMGSIVV
ILATDAPLLP HQCQRLAQRA SIGIARTGGG TEDSSGDVFL AFATGNQDLP PADYARKELP
QSTPLRMLNN DHISPLFAAA AEAVEEAIVN VLLAGEDMRT EDGRLVPALK GETLLAALRE
TGWPGR
|
|---|
| |