| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3820 |
|---|
| Symbol | alc |
|---|
| ID | 5356536 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 3955764 |
|---|
| End bp | 3956762 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640812870 |
|---|
| Product | allantoicase |
|---|
| Protein accession | YP_001349174 |
|---|
| Protein GI | 152984052 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG4266] Allantoicase |
|---|
| TIGRFAM ID | [TIGR02961] allantoicase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0678384 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCG ACCACGCGCC CTTCCGCCAC TACCTCGACC TCGCCGACGC GCGCCTGGGC
AGCCAGGTGG TCGCTGTCAG CGACGAGTGG TTCGCCCCGG CCAGCCGCAT GCTGCAGGCC
GGCGAGCCGG TGTGGAAGGA AGGCGTGTTC GACGACAGCG GCAAGTGGAT GGACGGCTGG
GAAACCCGCC GCAAGCGCTT CGAGGGCCAT GACCAGGCGG TGATCCGCCT GGGTGTGTCG
GGCGTGCTGA AGGGCGTCGA CATCGACACC CGCTTCTTCA CCGGCAACCA TCCGCCGGCG
GCTTCCCTGG ATGGCTGCTT CTGCGCCGAA GGCGATCCGG ATGACGGCAC GTCCTGGAGC
GAAGTGCTGC CGAGCGTGGA GCTGCAAGGC GATCGCCACC ACTACCACGC GATAGATGAC
GAGCGTCCCT GGACCCACCT GCGCCTGAAC ATCTACCCGG ACGGCGGCAT CGCCCGCCTG
CGCGTGTACG GCGTGCCCTA CCGCGACTGG CGCAGCCAGA CGCCGGGAAC GGCGCTCGAC
CTGGCCGCGG CGATCAACGG CGGCCGGGCG CTGGCGTGCT CCGACCAGCA CTTCGGGCCA
ATGGTCAACC TGCTCAAGCC CGGTCGCGCG CTCAATATGG GCGACGGCTG GGAAACCGGC
CGTCGCCGCA CCCCGGGCCA CGACTGGGCG ATCATCGCCC TCGGTCATCC CGGCAGTATC
GAGGCGGCGG TCGTCGATAC CCTGCACTTC AAGGGCAACT ATCCGGAAAG CTGCAGCATC
CAGGCCGCCT TCGTGGAAGA CGGAAACGAG GCCCGGATCG AGGCGCAGAG CCTCTTCTGG
CGCGAACTGC TGCCAGCGCA GAAGCTGGAA ATGCACCACG AACACCGGTT CGAACGGCAG
CTCAACGCCC TCGGCCCAGT CAGCCATGTA CGCCTGAACA TCTTTCCCGA CGGCGGCGTC
AGCCGCCTGC GCCTGTTCGG CAGGCCGCAA CTACCGTGA
|
|---|
| Protein sequence | MNADHAPFRH YLDLADARLG SQVVAVSDEW FAPASRMLQA GEPVWKEGVF DDSGKWMDGW
ETRRKRFEGH DQAVIRLGVS GVLKGVDIDT RFFTGNHPPA ASLDGCFCAE GDPDDGTSWS
EVLPSVELQG DRHHYHAIDD ERPWTHLRLN IYPDGGIARL RVYGVPYRDW RSQTPGTALD
LAAAINGGRA LACSDQHFGP MVNLLKPGRA LNMGDGWETG RRRTPGHDWA IIALGHPGSI
EAAVVDTLHF KGNYPESCSI QAAFVEDGNE ARIEAQSLFW RELLPAQKLE MHHEHRFERQ
LNALGPVSHV RLNIFPDGGV SRLRLFGRPQ LP
|
|---|
| |