Gene PSPA7_3778 details

Gene Information

• Locus tag: PSPA7_3778
• Symbol: ccoO1
• ID: 5355462
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 3912553
• End bp: 3913164
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640812828
• Product: cbb3-type cytochrome c oxidase subunit II
• Protein accession: YP_001349132
• Protein GI: 152989230
• COG category: [C] Energy production and conversion
• COG ID: [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit
• TIGRFAM ID: [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAACC ACGAAATACT CGAGAAGAAC GTCGGCCTGC TGGCCATCTT CATGGTGATC 
GCCGTCAGCA TCGGCGGCCT GACCCAGATC GTGCCGCTGT TCTTCCAGGA CGTGACCAAT 
ACCCCGGTCG AAGGCATGAA GCCGCGCACC GCCCTGGAAC TGGAAGGCCG CGACATCTAC 
ATCCGCGAAG GCTGCGTCGG CTGCCACTCG CAGATGGTCC GTCCGTTCCG TGCCGAAACC 
GAACGCTACG GCCACTACTC GGTCGCCGGT GAGAGCGTCT GGGACCACCC GTTCCTGTGG 
GGTTCCAAGC GTACCGGCCC GGACCTGGCC CGCGTCGGCG GCCGTTACTC CGACGACTGG 
CACCGCGCGC ACCTGTACAA CCCGCGCAAC GTGGTACCCG AGTCGAAGAT GCCTGCCTAC 
CCGTGGCTGG TAGAGAACAA GCTTGATGGC AAGGACACCG CCACCAAGAT GGAAGTCCTG 
CGCAAGCTGG GCGTGCCTTA CACCGACGAG GACATCGCCG GTGCACGTGA AGCCGTGAAG 
GGCAAGACCG AGATGGACGC CCTGGTGGCG TTCCTTCAAG GCCTGGGAAC CTCTATCAAG 
AGCAAACGGT GA 

 

Protein sequence

MKNHEILEKN VGLLAIFMVI AVSIGGLTQI VPLFFQDVTN TPVEGMKPRT ALELEGRDIY 
IREGCVGCHS QMVRPFRAET ERYGHYSVAG ESVWDHPFLW GSKRTGPDLA RVGGRYSDDW 
HRAHLYNPRN VVPESKMPAY PWLVENKLDG KDTATKMEVL RKLGVPYTDE DIAGAREAVK 
GKTEMDALVA FLQGLGTSIK SKR