Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3706 |
Symbol | trbB |
ID | 5354221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 3841162 |
End bp | 3842214 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640812756 |
Product | P-type conjugative transfer ATPase TrbB |
Protein accession | YP_001349060 |
Protein GI | 152986540 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.557258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCCG TTCCGCAGTC CATGAGCGCC ACGTCGCTCG ACCGCCGCAT CCAGATGCTG CGAACGGCGA TGGGGCCGCT GATCGCCGCC GCGCTCGAAG ACCCGGACGT GGTGGAGGTG ATGCTGAATC CTGATCGCAC CCTTTGGGTG GATCGGCTTT CCAGCGGACG CGCGCCGATG GACGTGGAAC TGCCCGAGGC GGACGGCGAG CGAATCATCC GCCTGGTCGC GGCCCACGTT GGCGCAGAAG TCCATCGCGG CCAGCCGCTG CTGTCCGCCG AGTTGCCCGA AACGGGCGAA CGCTTCGAGG GCATCTTGCC GCCGGCAGCG CCGGGGCCGG CCTTCGCGCT GCGCAAGCGC GCCATCGGCG TGATTCCGCT GGAGCGGTAC GTCATCGACG GGATGATGAC CAGCGCGCAA GCGGGCTTTC TCGTCCGCGC GGTGCGCGAG CGGCAGAACG TCTTGATCGC CGGCGCCACC AGCAGTGGCA AGACCACGCT CGCCAATGCG CTTTTGGCCG AGATTGCCGC GACGGGCGAC CGCGTGCTGG TGCTCGAAGA CACGGTGGAG CTGCAATGCG CGGCGCGTGA CCACGTTCCC CTGCGCACCC GCGCAGGCGT GGTGTCTATG ACCGAACTGG TGCGCTCGTC CATGCGCCTG CGGCCTGATC GCGTCGTGGT TGGCGAAGTG CGCGGCGCCG AGGCGCTGGA TCTCATCAAG GTGTGGGGAA CAGGCCATCC GGGCGGCATC GCCACGATCC ATGCCGGCTC CGCGCTCGGC GCGCTGCTGC GCCTGGAGCA ACTGATTCTC GAAGTGGCGG TGAGCCCGCC CCGTGCGCTG ATCGCGGAAG CGGTCAACGT GGTGATCCAC ATCGCTGGGC GCGGGCGCAA GCGCCGCATC AAGAGCATCG CCCGCGTCGT CGGCTTCGAC GGCGTGGGCT ACCAACTGGC GGACGCGCTG GAAGCGCCGT TTCCCGAGCT GCCGCCACTT CCCCATGCCG CACCTGCTGC GGCGACTTCC CCATCCCCTG ACTCACTTGG AGAACTGCCA TGA
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Protein sequence | MSAVPQSMSA TSLDRRIQML RTAMGPLIAA ALEDPDVVEV MLNPDRTLWV DRLSSGRAPM DVELPEADGE RIIRLVAAHV GAEVHRGQPL LSAELPETGE RFEGILPPAA PGPAFALRKR AIGVIPLERY VIDGMMTSAQ AGFLVRAVRE RQNVLIAGAT SSGKTTLANA LLAEIAATGD RVLVLEDTVE LQCAARDHVP LRTRAGVVSM TELVRSSMRL RPDRVVVGEV RGAEALDLIK VWGTGHPGGI ATIHAGSALG ALLRLEQLIL EVAVSPPRAL IAEAVNVVIH IAGRGRKRRI KSIARVVGFD GVGYQLADAL EAPFPELPPL PHAAPAAATS PSPDSLGELP
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