Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3704 |
Symbol | |
ID | 5355766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 3840513 |
End bp | 3840785 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640812754 |
Product | conjugal transfer protein |
Protein accession | YP_001349058 |
Protein GI | 152987984 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5268] Type IV secretory pathway, TrbD component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.460056 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCCC CGGACACCTT CGCGGATGGA TTCGAGGTGC CGCTGCACCG CTCGCTGACC GAGCCGATTC TGCTGGGCGG TGCGCCGCGC ACCGTGGCGA TCGCCAACGG CACGCTGGCC GCCGCTGTCG GCCTGGGACT GCAACTGTGG ATTCCCGGCA TGGTGCTCTG GATCGTCGGC CATTCGCTGG CGGTGTGGGG CGCTCGTGTA GATCCGCAGT TCATGGCCGT GTTCGCGCGG CACATCAAGC ACCGCCCGCT GCTGGACGTG TGA
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Protein sequence | MSAPDTFADG FEVPLHRSLT EPILLGGAPR TVAIANGTLA AAVGLGLQLW IPGMVLWIVG HSLAVWGARV DPQFMAVFAR HIKHRPLLDV
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