| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3703 |
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| Symbol | |
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| ID | 5354801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 3838044 |
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| End bp | 3840497 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640812753 |
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| Product | conjugal transfer ATPase TrbE |
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| Protein accession | YP_001349057 |
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| Protein GI | 152988490 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.165131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAATC TCGCCGAATA CCGCCAGCGC CCGGCCTTGC TTGCCGACTG GCTGCCCTGG
GCCGGGCTGG TCGCACCGGG CGTCGTCTTG AACAAGGACG GCAGTTTCCA GCGCACGGCC
CAGTTTCGCG GGCCTGACCT CGACAGCGCG ACGCAAGGCG AACTGATCGC CACGTCGGCG
CGGTTGAACA ACGCGCTGCG CCGCATGGGA TCGGGCTGGG CGCTATTCAT CGAAGCCGAG
CGCCGGCCTG CGGCCGATTA TCCGCACTCG GAGTTTCCCG AGCCGCTTTC GTGGGTGGTG
GAGGAAGAAC GCCGGGCCGC CTTCGAGGAA TCGGGCAATC ACTTCGAGAG CGGCTATCAC
CTGACGCTGC TTTACCTGCC GCCGGAAGAA TCCCGCGCCC GTGCAGCCAG GATGCTCTAC
GAGAACACGC CGACGAATGG CGTGGACTGG CGCGAGCGGC TGCAAGCCTT CGTCGCGGAA
GCGGATCGCG TCTTTGACCT GCTCGACGGC GTGATGCCGG AAATTGACTG GCTCGATGAC
GCGCAGACGC TGACCTACCT GCACGCCGCC ATTTCGACGC GGCGCTACCG CGTCGGCGTG
CCCGAAGTGC CGTTCCACAT CGACGCGCTC CTGACCGATT CCGCGCTGGT CGGCGGCTTG
GCACCCATGC TGGGCGACCA GCACCTGCGC GTGGTGTCAG TGCGGGGCTT CCCAACCTCG
ACCTGGCCGG GGATTCTGGA CGACCTCAAC CGCCTCGGTT TTGCGTACCG CTGGAGCACG
CGCTTTCTCT GCCTCGACAA AGCCGAGGCG GAAAAAGAGC TTTCCCGCCT GCGCCGCCAG
TGGTTCGCCA AGCGCAAGAA CGTCATCGCG CTGCTGCGCG AAACGATCTT CCAGCAGGAA
AGCCCGCTGG TCGATACCGA CGCCAACAAC AAGGCCGCCG ATGCCGACGC TGCCTTGCAG
GAGCTGGGCA GCGATCAAGT CGCCTTCGGC TATCTGACGG CGACCGTCAC CGTCATGGAC
GAGGACGCCG CCGTCGCAGA CGAGAAGCTG CGCATGGTGG AGCGCGTCAT CCAGGGCCGG
GGCTTCGTCA CCATCCCTGA AACGCTCAAT GCCGTGGATG CCTGGTTGTC CTCGCTCCCC
GGCAACGCCT ACGCCAACGT GCGCCAGCCC ATCGTCTCGA CACTGAACTT GGCGCACATG
ATGCCGGTGT CGGCGGTATG GGCTGGGCCG GAGAAGAACG ACCACCTCGA CGGCCCGCCG
CTGATCGTCA CGCGCACCGA TGGCGCCACG CCGTTCCGGC TGGTGACGCA CATCGGCGAT
GTGGGCCACA CGCTGGTCGC GGGGCCGACT GGCATGGGCA AGTCGGTCTT GCTCGCCACG
CTGGCGATGC AATTTCGCCG CTATCGCGGC TCGCGCGTCT TCGCCTTCGA CATGGGCCGC
TCCATGCGGG CCGCCATCCT CGGCCTGGGC GGCGAACACT ACGGCCTGGG CACGGATGGC
GAAATCGCCT TCCAGCCACT CGCGCGCATC GACCGTGAGG GCTACCGCAC CTGGGCCGCC
GAATGGATCG AAGGCCGCTT GCTGCACGAG GGCGTGGCGG TCGGCCCCGA CGAGAAAGCG
GCTATCTGGT CGGCGCTGGG AAGTCTCGCC GGTGCGCCGG TGGAGCAGCG CACGATGACG
GGACTTTCCG TGCTGCTGCA ATCGAACACG CTGCGGCAGG CGCTGTCGCC CTATGTGCTG
GGTGGCGCCC ACGGCAAGCA GCTGGACGCC GACCACGACC GGCTGGGCAT GGCCGACGTG
CAGTGCTTCG AGATGGAGGA GCTGATGCAC AGCAAGGCCG CCGTCATGGC CGTGCTGCAT
TACCTCTTTG CGCGTTTCGA TGAACGCTTC GACGGAGCGC CCACGCTGCT GATCCTCGAT
GAAGCGTGGC TGTTCCTCGA TGACCCGGTG TTTGCCGCGC GTATCCGCCA GTGGCTCAAG
ACACTGCGCA AGAAGAACGT CAGCGTCATC TTCGCCACGC AGAGCCTTGC CGACATCAAG
GATTCGAGCA TCGCGCCCGC GATCATCGAG AGCTGCGCGA GTCGGATTTT CTTGCCCAAC
CCGCAGGCGA ACGAGCCGCA GATTCGCACG ATCTACGAGG GCTTCGGCCT CAACAGGCGG
CAGATCGAAA TCGTCGCCAC CGCGCAGCCC AAGCGCGACT ACTACTACCA ATCCCGCCTC
GGCAACCGCC TGTTCGACCT CGACCTGGGG CCGGCGGCGC TGGCGTTTGC GGGCGCTTCC
ACGCCGCAAG ACCAGCGCGA CATAGACCGC GTGCTGCTGG ACGCCGGCGT GCCCGGCTTC
GCGGGCGCCT GGCTGCGCCA TCGCGGCCTC GATTGGGCGG CCGACCTGCT GCCCTCGTTC
CCCGGCCTCG CGCCGGGTTC CCTCGCTGAC CAACCCCTGG AGAACCTGTC ATGA
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| Protein sequence | MLNLAEYRQR PALLADWLPW AGLVAPGVVL NKDGSFQRTA QFRGPDLDSA TQGELIATSA
RLNNALRRMG SGWALFIEAE RRPAADYPHS EFPEPLSWVV EEERRAAFEE SGNHFESGYH
LTLLYLPPEE SRARAARMLY ENTPTNGVDW RERLQAFVAE ADRVFDLLDG VMPEIDWLDD
AQTLTYLHAA ISTRRYRVGV PEVPFHIDAL LTDSALVGGL APMLGDQHLR VVSVRGFPTS
TWPGILDDLN RLGFAYRWST RFLCLDKAEA EKELSRLRRQ WFAKRKNVIA LLRETIFQQE
SPLVDTDANN KAADADAALQ ELGSDQVAFG YLTATVTVMD EDAAVADEKL RMVERVIQGR
GFVTIPETLN AVDAWLSSLP GNAYANVRQP IVSTLNLAHM MPVSAVWAGP EKNDHLDGPP
LIVTRTDGAT PFRLVTHIGD VGHTLVAGPT GMGKSVLLAT LAMQFRRYRG SRVFAFDMGR
SMRAAILGLG GEHYGLGTDG EIAFQPLARI DREGYRTWAA EWIEGRLLHE GVAVGPDEKA
AIWSALGSLA GAPVEQRTMT GLSVLLQSNT LRQALSPYVL GGAHGKQLDA DHDRLGMADV
QCFEMEELMH SKAAVMAVLH YLFARFDERF DGAPTLLILD EAWLFLDDPV FAARIRQWLK
TLRKKNVSVI FATQSLADIK DSSIAPAIIE SCASRIFLPN PQANEPQIRT IYEGFGLNRR
QIEIVATAQP KRDYYYQSRL GNRLFDLDLG PAALAFAGAS TPQDQRDIDR VLLDAGVPGF
AGAWLRHRGL DWAADLLPSF PGLAPGSLAD QPLENLS
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