| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3700 |
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| Symbol | trbL |
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| ID | 5354556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 3835607 |
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| End bp | 3836992 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640812750 |
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| Product | conjugal transfer protein TrbL |
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| Protein accession | YP_001349054 |
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| Protein GI | 152985178 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
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| TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.182482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGACG TGACCATCAT CGACCAATTC CTCAACACCT TTGCCGCTTA TATCGAATCG
GGTTTCGGGC TGCTGCGGGG CGAAGTGGCC TTCCTCACTG CCACGCTGAT CGTCATCGAC
ATGACGATCG CCGGTCTGTA TTGGGCCATG AGTCATGCCA CCGGCCAGGG CGAGGACGTG
ATCGCCAAGC TGCTGCGCAA GGTGCTCTAC GTCGGTGCCT TCGCCTACAT CATCAATAAC
TTCAACTGGC TGGCCAGCAT CGTGTTCCGC TCGTTTGCGG GATTGGGCAT CACCGCCACC
GGCTCGGCCA TCACGATGGA GAACTTCTTG CAGCCGGGCC GGCTGGCGAA AACCGGCATC
GACTCCGGGG CGCCGATTCT GGAGCAGATC GGCGAGATGG CGGGCTTTCC CGAAGTGTTC
GTGAACCTCG ACCCCATCGT GGTGATGTTC CTCGCATGGC TGGTCGTGGT CTTGTGCTTC
TTCGCCCTGG CGATCCAACT GTTCATCACG CTGATCGAGT TCAAGCTGAC CACGCTCGCC
GGATTCGTGC TGGTGCCATT CGCGCTCTGG AACAAGACCG CGTTCCTCGC CGAAAAGGTT
TTGGGCAACG TGGTGGCCTC CGGCGTCAAG GTTCTGGTGC TGGCCGTGAT CGTCGGTATC
GGCTCGGGCT TGTTCGCTCA GTTCCAAGTC CATCCCGCCG AGCCGTCTAT CGACCACGCG
CTGGTCATCA TGCTGGCCTC GCTCACCTTG CTGGCGCTCG GGATCTTCGG CCCCGGCATC
GCCACGGGCC TCGTCTCCGG TGCGCCGCAG CTCGGCGCTG GCGCAATGGC CGGTGCTGCT
GTCGGCGCTG CCGGCACGGC CGTCGCCATC GGCGCCGCCG CGACGGGCGT GGGTGGCGCC
GTGGCTGCTG GTGCGCGCAT GGCCCCGGCT GCCGCCAAGC TGGCCGGTAG CGGTGCGCGC
GCCGCCACGT CGGCGGCCAG CAGTGCGAAG TCGGCGTTCC AGGCCGGTTC CGCCGCCGCT
GGCGGCGGCG CAAAGGGTGC GATGGCGGGC CTGGGCAACG TCGCCAAGAC CGGCGCGCAG
GCAGCCGGGC GAGGCGCTGC ATCCCGCGCT TCCGCTGCCG GGCAACGCAT GGCCGCTCCC
TTCCGCGCTG GCTGGAATGG CACTGCTGCC GATGGCGGCG CGGGGGCGGC ATCCGGTCAG
GGTGCCGCAG GCGAGGCCGC ATCCGGCGCC GCTACGGCGC AGACACAGGA ACAGCCCGCT
TGGGCCAAGC GCCTGCATCG CCGCCAGCAA CTCACCCACG CCGCGACCAC CACCGCCCAC
GCACTGCGCG GTGGCGATGG CGGCGGCTCC GGCCAGGGGC CGAGCCTGCG CGATTCCGAT
TCATAA
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| Protein sequence | MNDVTIIDQF LNTFAAYIES GFGLLRGEVA FLTATLIVID MTIAGLYWAM SHATGQGEDV
IAKLLRKVLY VGAFAYIINN FNWLASIVFR SFAGLGITAT GSAITMENFL QPGRLAKTGI
DSGAPILEQI GEMAGFPEVF VNLDPIVVMF LAWLVVVLCF FALAIQLFIT LIEFKLTTLA
GFVLVPFALW NKTAFLAEKV LGNVVASGVK VLVLAVIVGI GSGLFAQFQV HPAEPSIDHA
LVIMLASLTL LALGIFGPGI ATGLVSGAPQ LGAGAMAGAA VGAAGTAVAI GAAATGVGGA
VAAGARMAPA AAKLAGSGAR AATSAASSAK SAFQAGSAAA GGGAKGAMAG LGNVAKTGAQ
AAGRGAASRA SAAGQRMAAP FRAGWNGTAA DGGAGAASGQ GAAGEAASGA ATAQTQEQPA
WAKRLHRRQQ LTHAATTTAH ALRGGDGGGS GQGPSLRDSD S
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