Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3697 |
Symbol | |
ID | 5359398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 3832621 |
End bp | 3833898 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640812747 |
Product | conjugation TrbI family protein |
Protein accession | YP_001349051 |
Protein GI | 152989341 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.299925 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAGG ACGACACTCC CGACCTTGCC GCGCCTTCGG CGGGCAAGGT CGCGCCCGAG GCGGTGGTGC TGCGCGCCCA GCCGCGTCCG GTCACGCGCC TGAACCGGCG CACGCTGGCC ATCCTCGTCG GCGGCCTGTC GGTCGCCGTG CTTGGGGCCA CGATCTGGTC GCTGCAACCG CAGCGGCGCG GCGCCAACGA GCAGACCGAG CTTTACAACG TCGATCGCGT CTCAAAGTCC GAAGGGCTGG ATGGCCTGCC GGCCGACTAC TCGAAGCTGC CACCCCCTTT GCCGACATCC GTGCCCGAGC TGGGGCCGCC GCTGCCGGGT GATCTCGGCC CGGCCATCGT GAACTCGCAG CAGCCGGCCG TCGCCGCCTA CGCGGCCCCT GACCACGACC CCAACGACGC CTTGCGCAAA GAGGCAGAAG CCGCTGCGGC CTCGTCGGTG TTCTTCCGCT CGGGCGGCCA GGGCCAGGCT GCTGCCACGG TAGCGCAGGC AGCGCCGGGT GGTGCAAATG CGCTCGCAGC CTTTGACGCG CTCGCCGCCG GACCCGCCTC GACTGCGGCC CAGCCTGCCG ACCCAACCGC CGTGCAGAAC CGACAAGACC AGAAAGAGGC ATTCCTGAAA GCCGGTTCTA CGGAAACCCG CAATTCCGGC AACCTGGCGC TGCCGGCGTC GCCGTACCAA GTCATGGCCG GAACGGTGGT CGCCGGCGCG CTGGTGACGG GCATCAAGTC GGACCTGCCG GGCGACGTGA TCGCCACGGT GACGGAGCCG GTCTATGACA CGGCCACGGG CAAGTTCCTG CTGATCCCGC AGGGGTCGCG CATCCTCGGG CGCTACAACA GTCAGGTCAG CTACGGGCAG AGCCGCGTTC AAGTCGTCTG GAACCGCATC ATCCTGCCCG ACACATCCTC GCTGACGCTC GATAACTTGG CCGGCACCGA CCCGGCCGGC TACGCCGGCC TGGAGGATGG CGTCGATTGG CATTGGGATC GCATCTTTGC CGGCGCGGCG CTGACCACGC TGCTGGGCAT CGGTGCCGAG CTGGCCGCGC CGGAGAACCG GCAGGACGGC GATCACGTCA TCATCGCCGG CCGCGACAGC TTGCAGGACA GCGTGAACCA AGTCGGCCAG GAGATGACCC GGCGCAATCT CAACATCCAG CCCACCTTGA CCGAGCGGCC GGGCCTGCCG GTTCGCATCA TCGTCAATCG GGATCTTGTG CTGCGGCCCT ACCAGCCGCT GTTCTTCAAC CGAGGGACTT CACGATGA
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Protein sequence | MSQDDTPDLA APSAGKVAPE AVVLRAQPRP VTRLNRRTLA ILVGGLSVAV LGATIWSLQP QRRGANEQTE LYNVDRVSKS EGLDGLPADY SKLPPPLPTS VPELGPPLPG DLGPAIVNSQ QPAVAAYAAP DHDPNDALRK EAEAAAASSV FFRSGGQGQA AATVAQAAPG GANALAAFDA LAAGPASTAA QPADPTAVQN RQDQKEAFLK AGSTETRNSG NLALPASPYQ VMAGTVVAGA LVTGIKSDLP GDVIATVTEP VYDTATGKFL LIPQGSRILG RYNSQVSYGQ SRVQVVWNRI ILPDTSSLTL DNLAGTDPAG YAGLEDGVDW HWDRIFAGAA LTTLLGIGAE LAAPENRQDG DHVIIAGRDS LQDSVNQVGQ EMTRRNLNIQ PTLTERPGLP VRIIVNRDLV LRPYQPLFFN RGTSR
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