| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3628 |
|---|
| Symbol | |
|---|
| ID | 5354512 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 3758000 |
|---|
| End bp | 3758746 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640812678 |
|---|
| Product | acetoacetate decarboxylase |
|---|
| Protein accession | YP_001348982 |
|---|
| Protein GI | 152989685 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4689] Acetoacetate decarboxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.331441 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACATCG AAGAGGTCCT GCGCGCCGTT TCCACCCCGC TGGGCGACGG CGCCGCATAT
CCCGGCGGGC CGTACCGCTT CTTCCGCCGC GAATACCTGA ACATCTACTA CCGCAGCGAT
CCCGCGGCGC TGCGCCGGGT GGTCCCGGAA CCGTTGCGAC TGGACGGCGC GCTGGTGCGC
TTCGAGATCA TGCTGATGCC CGACAGCGTC GGGCTGGGGC GTTATGCCGA GGGTGGCCAG
GCGATCCGGG TGAGCCTCGA TGGCTGCCAT GGCGAGTACC TGCATGCGAT GTATGTCGAC
AGCCTGCCGG CCATCGCCGC CGGGCGCGAG GCCAGCGCCT ACCCGAAGAA GCTCGGCAAG
CCGGCCCTGT ACGTGGACTC CGATACCCTG GTCGGGAGCA TCGACTATGG CAGCCTGCGC
ATCGCCACCG CGACCATGGG CTACAAGCAC CGGCCGTTGC CCAGGGACGA GGCGCTGGCG
GCGATCGGTG TGGAAACCTT CATGCTCAAG ACCATGCGTG GCTACGACAG CCGCCCGCGG
ATCTGCGAGC TGGTGCGGAC CCGGATCAGC GACATCCGGC TGCACGAGGC CTGGACCGGC
CCGGCGCGCC TGCAGCTGTT CGCGCATGCC CTGGCGCCGA TGGCGGACCT GCCGGTGCTG
GAAGTGCTCG GCGCCAGTCA CCTGGTCGCC GATCTCAGCC TGGAGATGCC TGCCCTGGTC
TACGACTATC TGGCGCCTCC GGGCTGA
|
|---|
| Protein sequence | MNIEEVLRAV STPLGDGAAY PGGPYRFFRR EYLNIYYRSD PAALRRVVPE PLRLDGALVR
FEIMLMPDSV GLGRYAEGGQ AIRVSLDGCH GEYLHAMYVD SLPAIAAGRE ASAYPKKLGK
PALYVDSDTL VGSIDYGSLR IATATMGYKH RPLPRDEALA AIGVETFMLK TMRGYDSRPR
ICELVRTRIS DIRLHEAWTG PARLQLFAHA LAPMADLPVL EVLGASHLVA DLSLEMPALV
YDYLAPPG
|
|---|
| |