Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3605 |
Symbol | |
ID | 5359180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 3732073 |
End bp | 3733404 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640812655 |
Product | hypothetical protein |
Protein accession | YP_001348959 |
Protein GI | 152986797 |
COG category | [S] Function unknown |
COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGTGC ACAAGATCGT CTGGCAGGAA GGCATGCTGC TGCGCCCGCA GCACCTGCAA CACAACGACC GCTACTACGA CAACCAGATG AAGGCCCGGA CCCAGTTGCT GGGCAGCTAC AGCTGGGGCT TCCTCGCCCT GGAGCTGGAC CGCCAGTTCC TCAACATGGG CAAGCTGGTG ATCAGCCAGG CCTCCGGCGT ATTGCCCGAC GGCAGCCTGT TCGAACTCGG CGGCAACACC GAGCCGCTCG CTCTCGACGT GCCGCCCAAT ACCTCGAACG TGCCGATCTA CCTGGCCCTG CCGCTGGTCA CCGGCAACCA CATCGAGGCG CGCCGGCCGG AGCAGGCCGA GGTCCTGGCG CGCTATACCG CCTACGACCT GGAGGTGGCG GACTCCAACG CCGGCGAGGA TTCCATGGTG CAGGTCAGCT GTGCGCGGCC GGATTTTCGC CTGCTGCTCG GCGAGCAGCA GAGCGACCAG GCCTACGTCA AACTGAAGGT GGCGGTGGTG CTGGACACCA CGCCGGACGG GGTGATCAGC CTCGACCCTG ACTTCGTGCC GAGCCACCTC CACGCCCATG CATCCGCCTA CCTGCTGTCC TGCCTGAAGG AAGTGATCAG CATGCTCGGC CATCGCGGCG ACACCATCGC CGAGCGTATC CGGTCCAATG GCAAGGTCGG CGGCGCGGAG GTCGGCGATT TCATGATGCT GCAACTGATC AATCGCACCG AGTTGCTGCT GCGCCACTAC CTGGGATTGG AGCAGGTGCA TCCGGAGCAG TTGTACCGGG TGCTGCTGAC CATGCTCGGC GACCTCGCCA CCTTCGGCAG CGAGAGCAAG CGTCCGCGCC TGGACAGCCG TTACCAGCAC AGCGACCAGG GCGCCAGCTT CCGCAGGCTG ATGGAGGCGA TCCGCCAGGT CCTGTCGATG GTGCTCGAGC AGCATGCCAT CGAACTGCCT CTCCAGGCCC GCCAGTACGG CATCCTGGTC TCGCCCCTGC ACGACCACAA GCTGCTCGGC AGCGCCTCGT TCGTCCTCGC CGCCAGTGCC AATTGCGAGT CGGAGGAACT GCGCCAGCGC CTGCCCGCGC ATCTCAAGGT GGGCGCGGTC GAGCACATTC GCCAACTGGT CAACCTGCAC CTGCCGGGGA TCCGGGTCAA GCCGCTGCCG GTGGCGCCGC GGCAGATCCC GTTCCACTCC AGCAAGACCT ATTTCATTCT CGAACCCAAC GCCGAGGACA TGACCCAACT GGAGCGCTCC GGCGGTTTCG CGTTCCACGT ATCCGGCGAG TTCTCCGAGC TTGAGCTGAA ATTCTGGGCC ATCAGGAACT GA
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Protein sequence | MNVHKIVWQE GMLLRPQHLQ HNDRYYDNQM KARTQLLGSY SWGFLALELD RQFLNMGKLV ISQASGVLPD GSLFELGGNT EPLALDVPPN TSNVPIYLAL PLVTGNHIEA RRPEQAEVLA RYTAYDLEVA DSNAGEDSMV QVSCARPDFR LLLGEQQSDQ AYVKLKVAVV LDTTPDGVIS LDPDFVPSHL HAHASAYLLS CLKEVISMLG HRGDTIAERI RSNGKVGGAE VGDFMMLQLI NRTELLLRHY LGLEQVHPEQ LYRVLLTMLG DLATFGSESK RPRLDSRYQH SDQGASFRRL MEAIRQVLSM VLEQHAIELP LQARQYGILV SPLHDHKLLG SASFVLAASA NCESEELRQR LPAHLKVGAV EHIRQLVNLH LPGIRVKPLP VAPRQIPFHS SKTYFILEPN AEDMTQLERS GGFAFHVSGE FSELELKFWA IRN
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