Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3604 |
Symbol | |
ID | 5355520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 3731201 |
End bp | 3732070 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640812654 |
Product | hypothetical protein |
Protein accession | YP_001348958 |
Protein GI | 152984393 |
COG category | [S] Function unknown |
COG ID | [COG3455] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAAGG AAAGGGAATA CCACGAGGAC GAGAAGACCG TCCTCCTCGA TCACCAGGGA CAGGTACCGG CCCAGGGGCC GCTGACCGAT TTCGCCGAAC CGCCGCGCTT CGAGCAGCTC GAGGAGCGGA TGATCTACGC GGCGCGCCTG CGTCCGGGCG AAGCCTTCAA CGTCAGCCTG AACCCGCTGG TGGCGGCGGC TTCCGAACTG CTTTCGGAAG TGGTCCGACT CAAGCACAGC ACCGTGCTGG AGAACCTTGC GGCGCTCAAG GAGCGGTTGA CCTCCGCCAT GAAGCTCTTC GAATTCCGCG CCGTGCAGGA TGGCGTGGAA AACAGCCAGG TCATGGCGGC GCGCTACGTG CTGTGCACGG TGGTCGACGA GGCGGTGGTG ACCACCCCGT GGGGCAACGA AAGCGAATGG TCGAAGATCA GCCTGCTGAG CAGCTTCCAT AACGAGACCT TCGGCGGCGA GAAGTTCTTC CAGTTGCTTG ACCGGCTGTC GAAGAACCCG GTCAAGCATC TGCCGATGCT GGAGCTGATG TACCTCTGCC TGGCCCTCGG CTTCGAGGGC AAGTACCGGG TGATGGCTCG CGGCGTGCTC GACCTGGACG GTATTTCCGA TGCGCTCTAC CGGCAGATCC GCCAGTTGCG CGGCGACGTG CCGCGCGAAC TGTCACCGCA CTGGCAGGGG CTCAGCGACC AGCGTCGCGG CCTGGTGCGG ATCGTGCCCT GGTGGATGGT GGCGTTGTTC ACCCTGGTCT GCCTGGTGGT GATGTATTCG GGATTCGCCT GGGTTCTCGG CGAGCAACGC GACACGGTGC TGCAGCCATA CCAGTCGCTC GATGCGGCGG CAGGACAGCC CGGTTCGTAA
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Protein sequence | MIKEREYHED EKTVLLDHQG QVPAQGPLTD FAEPPRFEQL EERMIYAARL RPGEAFNVSL NPLVAAASEL LSEVVRLKHS TVLENLAALK ERLTSAMKLF EFRAVQDGVE NSQVMAARYV LCTVVDEAVV TTPWGNESEW SKISLLSSFH NETFGGEKFF QLLDRLSKNP VKHLPMLELM YLCLALGFEG KYRVMARGVL DLDGISDALY RQIRQLRGDV PRELSPHWQG LSDQRRGLVR IVPWWMVALF TLVCLVVMYS GFAWVLGEQR DTVLQPYQSL DAAAGQPGS
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