Gene PSPA7_3529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_3529 
SymboloprF 
ID5353934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp3657002 
End bp3658054 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content60% 
IMG OID640812579 
Productouter membrane protein OprF precursor 
Protein accessionYP_001348883 
Protein GI152985208 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0341835 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTGA AGAACACCTT AGGCGTTGTC ATCGGCTCGC TGGTTGCCGC TTCGGCAATG 
AACGCCTTCG CCCAGGGCCA GAACTCGGTA GAGATCGAAG CCTTCGGCAA GCGCTACTTC
ACCGACAGCG TTCGCAACAT GAAGAACGCT GACCTGTACG GCGGCTCGAT CGGCTACTTC
CTGACCGACG ACGTCGAGCT GGCTCTGTCC TACGGTGAGT ACCACGATGT TCGTGGCACC
TACGAAACCG GCAACAAGAA GGTCCATGGC AACCTGACCT CCCTGGACGC CATCTACCAC
TTCGGTACCC CGGGCGTAGG TCTGCGTCCG TACGTGTCGG CTGGTCTGGC TCACCAGAAC
ATCACCAACA TCAACAGCGA CAGCCAAGGC CGTCAGCAGA TGACCATGGC CAACATCGGC
GCTGGTCTGA AGTACTACTT CACCGAGAAC TTCTTCGCCA AGGCCAGCCT CGACGGCCAG
TACGGCCTGG AGAAGCGTGA CAACGGTCAC CAGGGTGAGT GGATGGCTGG CCTGGGCGTC
GGCTTCAACT TCGGTGGTTC GAAAGCCGCT CCGGCTCCGG AACCGGTTGC CGACGTTTGC
TCCGACTCCG ACAACGACGG CGTCTGCGAC AACGTCGACA AGTGCCCGGA CACCCCGGCC
AACGTCACCG TTGACGCCAA CGGCTGCCCG GCTGTCGCCG AAGTCGTACG CGTACAGCTG
GACGTGAAGT TCGACTTCGA CAAGTCCAAG GTCAAAGAGA ACAGCTACGC TGACATCAAG
AACCTGGCCG ACTTCATGAA GCAGTACCCG TCCACTTCCA CCACCGTTGA AGGTCACACC
GACTCCGTCG GCACCGACGC TTACAACCAG AAGCTGTCCG AGCGTCGTGC CAACGCCGTT
CGTGACGTAC TGGTCAACGA GTACGGTGTG GAAGGTGGTC GCGTGAACGC TGTCGGTTAC
GGCGAGTCCC GCCCGGTTGC CGACAACGCC ACCGCTGAAG GCCGCGCTAT CAACCGTCGC
GTTGAAGCCG AAGTAGAAGC CGAAGCCAAG TAA
 
Protein sequence
MKLKNTLGVV IGSLVAASAM NAFAQGQNSV EIEAFGKRYF TDSVRNMKNA DLYGGSIGYF 
LTDDVELALS YGEYHDVRGT YETGNKKVHG NLTSLDAIYH FGTPGVGLRP YVSAGLAHQN
ITNINSDSQG RQQMTMANIG AGLKYYFTEN FFAKASLDGQ YGLEKRDNGH QGEWMAGLGV
GFNFGGSKAA PAPEPVADVC SDSDNDGVCD NVDKCPDTPA NVTVDANGCP AVAEVVRVQL
DVKFDFDKSK VKENSYADIK NLADFMKQYP STSTTVEGHT DSVGTDAYNQ KLSERRANAV
RDVLVNEYGV EGGRVNAVGY GESRPVADNA TAEGRAINRR VEAEVEAEAK