| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3529 |
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| Symbol | oprF |
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| ID | 5353934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 3657002 |
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| End bp | 3658054 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640812579 |
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| Product | outer membrane protein OprF precursor |
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| Protein accession | YP_001348883 |
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| Protein GI | 152985208 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0341835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTGA AGAACACCTT AGGCGTTGTC ATCGGCTCGC TGGTTGCCGC TTCGGCAATG
AACGCCTTCG CCCAGGGCCA GAACTCGGTA GAGATCGAAG CCTTCGGCAA GCGCTACTTC
ACCGACAGCG TTCGCAACAT GAAGAACGCT GACCTGTACG GCGGCTCGAT CGGCTACTTC
CTGACCGACG ACGTCGAGCT GGCTCTGTCC TACGGTGAGT ACCACGATGT TCGTGGCACC
TACGAAACCG GCAACAAGAA GGTCCATGGC AACCTGACCT CCCTGGACGC CATCTACCAC
TTCGGTACCC CGGGCGTAGG TCTGCGTCCG TACGTGTCGG CTGGTCTGGC TCACCAGAAC
ATCACCAACA TCAACAGCGA CAGCCAAGGC CGTCAGCAGA TGACCATGGC CAACATCGGC
GCTGGTCTGA AGTACTACTT CACCGAGAAC TTCTTCGCCA AGGCCAGCCT CGACGGCCAG
TACGGCCTGG AGAAGCGTGA CAACGGTCAC CAGGGTGAGT GGATGGCTGG CCTGGGCGTC
GGCTTCAACT TCGGTGGTTC GAAAGCCGCT CCGGCTCCGG AACCGGTTGC CGACGTTTGC
TCCGACTCCG ACAACGACGG CGTCTGCGAC AACGTCGACA AGTGCCCGGA CACCCCGGCC
AACGTCACCG TTGACGCCAA CGGCTGCCCG GCTGTCGCCG AAGTCGTACG CGTACAGCTG
GACGTGAAGT TCGACTTCGA CAAGTCCAAG GTCAAAGAGA ACAGCTACGC TGACATCAAG
AACCTGGCCG ACTTCATGAA GCAGTACCCG TCCACTTCCA CCACCGTTGA AGGTCACACC
GACTCCGTCG GCACCGACGC TTACAACCAG AAGCTGTCCG AGCGTCGTGC CAACGCCGTT
CGTGACGTAC TGGTCAACGA GTACGGTGTG GAAGGTGGTC GCGTGAACGC TGTCGGTTAC
GGCGAGTCCC GCCCGGTTGC CGACAACGCC ACCGCTGAAG GCCGCGCTAT CAACCGTCGC
GTTGAAGCCG AAGTAGAAGC CGAAGCCAAG TAA
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| Protein sequence | MKLKNTLGVV IGSLVAASAM NAFAQGQNSV EIEAFGKRYF TDSVRNMKNA DLYGGSIGYF
LTDDVELALS YGEYHDVRGT YETGNKKVHG NLTSLDAIYH FGTPGVGLRP YVSAGLAHQN
ITNINSDSQG RQQMTMANIG AGLKYYFTEN FFAKASLDGQ YGLEKRDNGH QGEWMAGLGV
GFNFGGSKAA PAPEPVADVC SDSDNDGVCD NVDKCPDTPA NVTVDANGCP AVAEVVRVQL
DVKFDFDKSK VKENSYADIK NLADFMKQYP STSTTVEGHT DSVGTDAYNQ KLSERRANAV
RDVLVNEYGV EGGRVNAVGY GESRPVADNA TAEGRAINRR VEAEVEAEAK
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