Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3525 |
Symbol | nirB |
ID | 5353784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 3650611 |
End bp | 3653061 |
Gene Length | 2451 bp |
Protein Length | 816 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640812575 |
Product | assimilatory nitrite reductase large subunit |
Protein accession | YP_001348879 |
Protein GI | 152984829 |
COG category | [C] Energy production and conversion |
COG ID | [COG1251] NAD(P)H-nitrite reductase |
TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGA TCAAACTGGT GATGGTCGGC AACGGCATGG CCGGGGTCCG CACCCTGGAA GAACTGCTCA AGCTCAACTC GGACTTCTAC GACATCACGG TGTTCGGCGC CGAGCCCCAT CCCAACTACA ACCGCATCCT GCTGTCCCCG GTGCTGGCCG GCGAACAGAC CTTCGAGGAA ATCGTCCTCA ACGACCTCGA CTGGTATGCG GAAAACGGCA TCAAGCTGCT CCTCGACCGC AAGGTGGTGC AGATCGACCG GGTCCGCCGC AAGGTGGTCG CCGCCGATGG CACCGAAGCC GAGTACGATC GCCTGCTGCT GGCCACCGGC TCGCTGCCCT TCATCCTGCC GATCCCCGGC AATCGCCTGC AGGGCGTGAT CGGCTACCGC GACATCGCCG ACACCCAGGC CATGATCGAC TGCGCCCGGA GCCACAGCCA CGCGGTGGTG ATCGGCGGCG GCCTGCTCGG CCTGGAGGCG GCCAATGGCC TCAAGCAGCG CGGGATGGAC GTGACCGTTG TGCACCTCTC CGACTGGCTG CTGGAGCGCC AGCTCGACCG CACCGCCGGC AAGCTCCTGC AAGGCGCGCT GGAAGCCCGC GGCATCCGCT TCCGCCTGAA CACCCAGACC CGCGAGCTGA TGGACAACGG CAGCGGCCGG GTCTGTGCCG TGCAGTTCAA CGACGACGAC GTGATTCCCG CCGACCTGGT GGTAATGGCC GCCGGCATCC GTCCCAACAC CGAGCTGGCC GAAAGCGCAG GCATCCCCTG CAACCGCGGC ATCCTGGTCA ACGACACCCT GCAGACCTAC GATCCGCGCA TCTATGCGGT CGGCGAATGC GCCAACCACC GTGGCATCGC CTACGGCCTG GTGGCGCCAC TGTTCGAACA GGCCAAGGTC TGCGCCAACC ACCTGGCTCA TCTCGGCTAT GCCCGCTACC AGGGCTCGGT GACCTCGACC AAGCTCAAGG TGACCGGCAT CGACCTGTTC TCCGCCGGCG ACTTCATCGG CGGCGAAGGC AGCGAGACCA TCACCCTTTC CGACCCCATC GGCGGCGTCT ACAAGAAGCT GGTGATCAAG GACGACGTGC TGGTCGGCGC CTGCCTCTAT GGCGACACCA CCGACGGCGG CTGGTACTTC CGGCAGATCC GCGAAAACCA CAACGTGGCG CAGATCCGCG ACCACCTGAT GTTCGGCGAG AACGCCCTCG GCGATGTCGG CCACCAGGGC CAGAACAGCG CCGCGAGCAT GCCCGACACG GCCGAAGTAT GCGGTTGCAA CGGCGTCTGC AAGGGCGCCA TCGTCAAGGC GATACAGGAA CACGGCCTGT TCAGCGTCGA CGAAGTCAAG AAACACACCA AGGCCGCCAG CTCCTGCGGC TCCTGCGCGG GCCTGGTCGA GCAGATCCTG ATCAGCACCG TCGGCGGCGC CGCCGACGTC AAGCCGAAGA GCGAGAAGGC CATCTGCGGT TGCAGCGAGC TCAACCACGG GCAGATCCGC AAGGCCATCC GCGAACACCG GCTGACCAGT CTCGACGCCG CCATGCGCTT CATGGACTGG AAGACCCCGA ACGGCTGCGC CACCTGCCGC CCAGCGCTGA ACTACTACCT GATCTCGACC TGGCCGGGAG AGGCCAGGGA CGACCCGCAG TCGCGCCTGA TCAACGAACG TGCCCACGCC AATATCCAGA AGGACGGCAC CTACTCGGTG GTCCCGCGGA TGTGGGGCGG TGTGACCAGC GCCGCCGAGT TGCGGCGCAT CGCCGACGTC GCCGACAAGT ACCAGGTGCC GATGGTCAAG GTCACCGGCG GCCAGCGCAT CGACCTGCTG GGGGTGAAGA AGGACGACCT GCCGGCCATC TGGAAAGACC TCGACATGCC CTCGGGACAT GCCTACGGCA AATCCATCCG CACCGTGAAG ACCTGCGTCG GCAGCGAGTT CTGCCGCTTC GGCACGCAGA ACTCGACGCA ACTGGGCATC GACCTGGAAC ACGACCTGTT CAACATGTGG TCGCCGCACA AGGTCAAGCT GGCGGTTTCC GGCTGCCCGC GCAATTGCGC CGAGGCCGGG ATCAAGGATG TCGGCATCAT CGGCGTGGAC TCCGGCTGGG AGATGTACAT CGGCGGCAAC GGCGGGATCA AGACCGAGGT CGCGGAGTTC TTCGTCAAGC TCAAGACCGC CGAAGAGGTG CGCGAATACA ACGGCGCCTT CCTCCAGCTC TACCGCGAGG AAGCCTTCTA TCTGGAGCGC ACGGTGCATT ACCTGCAGCG GGTCGGCATG GCGCATATCC GCAAGGCGGT GGTCGAGGAC GCGGAAAACC GCAAGGCACT CAACGCCCGC CTGCAATTCG CCCTGTCCTT CGAGCAGGAC CCATGGAAGC AGCGCATCGA ACAGCCGCTA CTGAAGAAGG AGTTCGAACG GATTCCGCTC AAGCAACTGG AAAACGTCTG A
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Protein sequence | MKKIKLVMVG NGMAGVRTLE ELLKLNSDFY DITVFGAEPH PNYNRILLSP VLAGEQTFEE IVLNDLDWYA ENGIKLLLDR KVVQIDRVRR KVVAADGTEA EYDRLLLATG SLPFILPIPG NRLQGVIGYR DIADTQAMID CARSHSHAVV IGGGLLGLEA ANGLKQRGMD VTVVHLSDWL LERQLDRTAG KLLQGALEAR GIRFRLNTQT RELMDNGSGR VCAVQFNDDD VIPADLVVMA AGIRPNTELA ESAGIPCNRG ILVNDTLQTY DPRIYAVGEC ANHRGIAYGL VAPLFEQAKV CANHLAHLGY ARYQGSVTST KLKVTGIDLF SAGDFIGGEG SETITLSDPI GGVYKKLVIK DDVLVGACLY GDTTDGGWYF RQIRENHNVA QIRDHLMFGE NALGDVGHQG QNSAASMPDT AEVCGCNGVC KGAIVKAIQE HGLFSVDEVK KHTKAASSCG SCAGLVEQIL ISTVGGAADV KPKSEKAICG CSELNHGQIR KAIREHRLTS LDAAMRFMDW KTPNGCATCR PALNYYLIST WPGEARDDPQ SRLINERAHA NIQKDGTYSV VPRMWGGVTS AAELRRIADV ADKYQVPMVK VTGGQRIDLL GVKKDDLPAI WKDLDMPSGH AYGKSIRTVK TCVGSEFCRF GTQNSTQLGI DLEHDLFNMW SPHKVKLAVS GCPRNCAEAG IKDVGIIGVD SGWEMYIGGN GGIKTEVAEF FVKLKTAEEV REYNGAFLQL YREEAFYLER TVHYLQRVGM AHIRKAVVED AENRKALNAR LQFALSFEQD PWKQRIEQPL LKKEFERIPL KQLENV
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