Gene PSPA7_3486 details

Gene Information

• Locus tag: PSPA7_3486
• ID: 5356423
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 3610932
• End bp: 3612779
• Gene Length: 1848 bp
• Protein Length: 615 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 640812536
• Product: ABC transporter periplasmic binding protein
• Protein accession: YP_001348845
• Protein GI: 152984259
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG4166] ABC-type oligopeptide transport system, periplasmic component

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCCGTC CCCGCTTCAC CCCCCTTCTG GCAGCCCTGC TGTTCGGCTG CTGCGGCCCC 
CTTCTCGCCG CACCGAAGCA CGCACTCACG CTCTACGACG AAGCCCCCAA GTACCCCGCC 
GACTTCAAGC ACTTCGACTA CGTCAATCCG GACGCGCCGA AGGGCGGCAT CCTCCGCCAG 
GCCGACTTCG GCGGCTTCGA CAGCCTCAAC CCGTTCATCG GCAAGGGCGT TTCCGCACCT 
TCGCTGGGCC TGATCTACGA CACCCTGGCC TTCCAGTCGC AGGACGAGCC CTTCACTGAG 
TACGGCCTGC TCGCCGAGAA GATCGAGAAG GCCCCGGACA ACAGCTACGT GCGCTTCTAC 
CTGCGTCCCC AGGCACGCTT CAACGACGGC ACGCCGGTGA CGGCCGAGGA CGTGGTGTTC 
ACCTTCGAGA CCCTGGTGAG CAAGGGCGAC CCGATGTACC GCAACTATTA CGCGGATGTC 
GACAAGGTGG TCGCCGAAGA CAAGCTGCGC GTGCGCTTCG ACTTCAAGCA CGCCGGCAAC 
CGCGAATTGC CGCTGATCCT CGGGCAGATC GCGATCCTGC CGAAACACTG GTGGGCCGAC 
CGCGACTTTT CCAAGACCGG CATGGAAATC CCGGTAGGCA GCGGTCCCTA CCGCATCGCC 
AAGGTCGATC CGGGACGCTC CATCAGCTAC GAGCGGGTCA AGGACTGGTG GGCCAAGGAC 
CTTCCGGTCT CCCGCGGACT CTATAACTTC GACACCATCA CCATCGACTC CTATCGCGAC 
ATGTCGGTCG CCCTGGAAGC CTTCAAGGCC GGTCAGTACG ACGTCAACCT GGAATACTCG 
GCGAAGGACT GGGCCACCGG CTACGAGTCG CCGGCGCTGC GCGACGGGCG CTTCGTCAAG 
GCCAGCATCC ACAATTACAA CCCGGTCGGC ATGCAGGGCT TCGCCTTCAA TATCCGCCGC 
CCGGTGTTCC AGGACCGCCG GGTACGCCAG GCGATCAGCC TGTTGTTCGA CTTCGAATGG 
TCGAACAAGC AGCTGTTCTT CAGCTCCTAC AAGCGCACCA ACAGCTATTT CGAGAACTCG 
GAGATGGCCG CCCACCAGTT GCCCAGCGAA GCCGAGCTGA AGATCCTCGA ACCGCTGCGC 
GGCAAGATTC CCGACGAAGC CTTCGACCAG GTCTTCCAGA ACCCGGTCAA CGATGGCAGC 
GGGGTGATCC GCGAGCAGCG GCGCAAGGCC TACCGGTTGC TCACCGAAGC CGGCTACAGG 
ATCGAGAACA ACCGCATGGT GGGTCCCGAC GGACAACCGC TGACCTTCGA GTTCATGCTG 
TTCCAGGCCA ACATGGAACG GGTCATCCTG CCGTTCAAGC GTAACCTGGC CGAACTTGGC 
ATCGACATGC AGATCCGCCG CGTCGACGTC TCGCAGTTCG TCAACCGCCT GCGCTCGCGG 
GATTTCGACA TGACCTCGGC GACCTGGCCG CAATCCAACT CGCCGGGCAA CGAGCAGCGC 
GAGTTCTGGC ATTCCAGCAG CGCCGACAAG GCCGGCAGCC GCAACTTCAT CGGCCTCAAG 
GATCCGGCCA TCGACAGCCT GGTGGACAGC CTGATCCAGT CCGACTCGCG GCAGAGCCTG 
ATCGACCATA CCCGCGCCCT CGACCGGGTA TTGCTATGGG GCTACTACGT GGTGCCGAAC 
TACTACGTCG ACACCTGGCG GGTCGCGTAC TGGAACCGCT TCGGCCGGCC CAAGGTCACC 
CCGCTCTACG ACTGGGGCCT GATGACCTGG TGGCAGACCA GCGACAAGGC GCTGCCGAGC 
AAGCCGCAAG CCGAAGCCGC GCAAGACGCC GCGCCGGAAC GGGAGTAA 

 

Protein sequence

MIRPRFTPLL AALLFGCCGP LLAAPKHALT LYDEAPKYPA DFKHFDYVNP DAPKGGILRQ 
ADFGGFDSLN PFIGKGVSAP SLGLIYDTLA FQSQDEPFTE YGLLAEKIEK APDNSYVRFY 
LRPQARFNDG TPVTAEDVVF TFETLVSKGD PMYRNYYADV DKVVAEDKLR VRFDFKHAGN 
RELPLILGQI AILPKHWWAD RDFSKTGMEI PVGSGPYRIA KVDPGRSISY ERVKDWWAKD 
LPVSRGLYNF DTITIDSYRD MSVALEAFKA GQYDVNLEYS AKDWATGYES PALRDGRFVK 
ASIHNYNPVG MQGFAFNIRR PVFQDRRVRQ AISLLFDFEW SNKQLFFSSY KRTNSYFENS 
EMAAHQLPSE AELKILEPLR GKIPDEAFDQ VFQNPVNDGS GVIREQRRKA YRLLTEAGYR 
IENNRMVGPD GQPLTFEFML FQANMERVIL PFKRNLAELG IDMQIRRVDV SQFVNRLRSR 
DFDMTSATWP QSNSPGNEQR EFWHSSSADK AGSRNFIGLK DPAIDSLVDS LIQSDSRQSL 
IDHTRALDRV LLWGYYVVPN YYVDTWRVAY WNRFGRPKVT PLYDWGLMTW WQTSDKALPS 
KPQAEAAQDA APERE