Gene PSPA7_3485 details

Gene Information

• Locus tag: PSPA7_3485
• ID: 5355091
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 3609055
• End bp: 3610935
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640812535
• Product: putative solute-binding protein
• Protein accession: YP_001348844
• Protein GI: 152986591
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG4166] ABC-type oligopeptide transport system, periplasmic component

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCCGGACG ATTCGTTGTC AAAAATAGCC AAGGACCCGG ATACACGCCT GATGCGTCGC 
CTCTCCTTCC TGATCCTCGG CCTGGCCGCA AGCCTGCCCG GCTTCGCCGC GATTACCCAG 
AGCCATGGTT ATGCCCAGTT CGGCACGCTC AAGTATCCGG CCAACTTCCA GCATTTCGAC 
TGGACCAATC CCGACGCTCC CAAGGGCGGC ACCCTGCGCC TGATGGCCTC GGGCAGCTTC 
GACACGCTCA ACCCCTACAC CCTGAAAGGC ACCAGTCCGA TCGGCACCGG CGATTTCCTG 
CAGTACGGCG TCAACGAGCT GAACGAGCCG CTGATGGTCG GCACCGGCCT GTACGATCCC 
TCCGGCGACG AGGCGGCCTC CAGCTATGGC CTGATCGCCA AGAGCGTGGA ATACGCGGAA 
AACCGCAGCT GGGTGGTATT CAACCTGCGC CCGGAGGCAC GCTTCCACGA CGGCAGGCCG 
ATCACCGCCA GCGACGTGGC CTTTTCCTAC CGCACCCTGG TCAAGCAGGG ACATCCGATG 
TACCGCACCT ATCTGCAGGA GGTGAAACGG GTCGACATCC TTAACCCCCA CCGGGTACGT 
TTCGTCCTGC GGCGTTCCGG CAACCCGCTG TTGATCCTGC GCCTCGGCGA GCTTCCGGTC 
CTGCCACAGC ACTACTGGAA GGATCGCGAC TTCCGTGCCA CCACCTTCAC ACCTCCGCTG 
GGCAGCGGTC CCTACCGTGT CGTCGAGGTC GATCCCGGCC GGCGCCTGGT ATTCGAACGG 
GTCAAGGACT GGTGGGGGGA AAAGTTGCCG GTAAACCGCG GCAAGTACAA CTTCGACCGG 
GTCGTGGTGG ATTTCTACCG GGACAACGGA GTCGCCTTCG AAGCCTTCAA GGCCGGCGAG 
TTCGATTTCT ATATCGAGCA CCAGGCGAAG AACTGGCTGA ACAACTACCG CTTTCCCGCC 
GTCCTGCGCG GCGAAGTGAT CCGCACGGAA ATCCCGCACC AGATACCCAG CCAGACCCAG 
GCGCTGTTCA TGAACACCCG CCGCGCCGTA TTCAAGGAAC GCGCGCTGCG CCAGGCGCTG 
GGCGAGATGT TCGACTTCGA ATGGACCAAC CGTGCCCTCT TCAGCAATTC CTACCTGCGC 
TCGCTCAGCT ACTACCCGAA CAGCGAATTC GCCGCCCGCG GTGTTCCCGA AGGCCAGGAA 
TGGCTATACC TGTCGCCGTA CCGCAAGCAG TTGCCGGCGC AGTTGTTCAA GCAGCCTTTC 
AGCCTGCCGA CCACCGAGGG GCGCGGCATT CCCCGTGAAA CCCTCAGGCA TGCGCTCGGT 
CTACTGGCCG AAGCCGGCTG GAAGCTGTCC GGCGACCGAC TGCTGAATAA GAAGGGCGAA 
CCGCTGCGTT TCGAAATCCT GCTGGTCAAT CCGAGCCTGG AGCGGATTCT CCAGCCCTAC 
CGCGAAAACC TCGCCAGCAT CGGTATCGAC GCGCGCCTGC GTACCGTCGA CCGCGCCCAG 
TACAAGCAGC GCCTGGACCA GTTCGACTAC GACATGATCC TCATGACCCT GCCGCAGACC 
CTGAGCCCCG GGCTGGAGCA GTGGCAGTAC TTCCACTCCA GCCAGGCGAA GGTCAAGGGC 
AGCAAGAACT ACGCGGGGAT CGCCAACCCG GTGGTCGACG CGATGCTCAA CCGCCTGCTC 
GGCGCCCACA GCCGCGACGA GCAGGTCGCC GCCGCCCGCG CCCTGGACCG AACCTTGCTC 
TGGCAGTACT ACAGCATTCC CAACTGGTAC CTCAATTCGC ACCGCCTGGC GTACCGCAAC 
CGTTTCGCCT TCGTCACCAC CCCGCCCTAC ACCCTGGGCC TGCGCGCGTG GTGGCAGAAA 
AACCTGGAGA CGTCCCGATG A 

 

Protein sequence

MPDDSLSKIA KDPDTRLMRR LSFLILGLAA SLPGFAAITQ SHGYAQFGTL KYPANFQHFD 
WTNPDAPKGG TLRLMASGSF DTLNPYTLKG TSPIGTGDFL QYGVNELNEP LMVGTGLYDP 
SGDEAASSYG LIAKSVEYAE NRSWVVFNLR PEARFHDGRP ITASDVAFSY RTLVKQGHPM 
YRTYLQEVKR VDILNPHRVR FVLRRSGNPL LILRLGELPV LPQHYWKDRD FRATTFTPPL 
GSGPYRVVEV DPGRRLVFER VKDWWGEKLP VNRGKYNFDR VVVDFYRDNG VAFEAFKAGE 
FDFYIEHQAK NWLNNYRFPA VLRGEVIRTE IPHQIPSQTQ ALFMNTRRAV FKERALRQAL 
GEMFDFEWTN RALFSNSYLR SLSYYPNSEF AARGVPEGQE WLYLSPYRKQ LPAQLFKQPF 
SLPTTEGRGI PRETLRHALG LLAEAGWKLS GDRLLNKKGE PLRFEILLVN PSLERILQPY 
RENLASIGID ARLRTVDRAQ YKQRLDQFDY DMILMTLPQT LSPGLEQWQY FHSSQAKVKG 
SKNYAGIANP VVDAMLNRLL GAHSRDEQVA AARALDRTLL WQYYSIPNWY LNSHRLAYRN 
RFAFVTTPPY TLGLRAWWQK NLETSR