Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3411 |
Symbol | |
ID | 5356144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 3530349 |
End bp | 3531626 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640812462 |
Product | hypothetical protein |
Protein accession | YP_001348771 |
Protein GI | 152984005 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.527264 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCGGGC GCCGGCAGTA CGCGCGCAAG GGACGGCGGT GCGGGAAGGG AGCCATCTGG CTCCTTTCCC TGGGCCTGCC GATGTTCGCG CCGGCCATGC CCCTGGACCA GGCGGTCAGG GCAGGGCTGG CGATCCACCC GGAAGTACGA TCCGCGATGG CCGAAGCGGA CCGCGCAGGC ACCGAGGTGG AGATGGCCAA AGGGGGGTAC TACCCCTCCG TCACGATGTC CGGAGGGCCG CAGGAGTTCG ACTTCGGCGA GATCGTCTAC GATCTCACCG CGTCGCAGAT GCTGTACGAC TGGGGGCGGG TGACGAGCAA GGTGGACAGC GCCAGCGCGA CCCAGCGCAA GCTGTCCGAG GCGGTGCTGG TGGCGCGCGA CGACGCGGCG CTGGACATCG TCGAGACCTA TCTCGACGTG CTCGCCTCGG AGCGCCGGGT CGAGGCGGTA CGCGCGCACA TCCAGCGCCT CGATGGCATC CGCGAGATGA CCCAGGCGCG CGGCGGCGAC GGCTATGCCG ACCGCAGCGA GCTGGACCGC GCCAACCTGG AGCTGGCGCG TGCCCAGGAA CAGCTGTCAC TGGAAAAGGG CAACCTGCAG GACGCGCGCA ACCAGTACGC GATCCTGGTC GGCCAGGAGC CTGCCGACCT GGTGGAGCCT GAGCCGATGT CGCTGCAACG CTACCTGGCG GCCAGCGATA TGGCGCGGGT GATCCGCGAA TCGCCTTTGC AGCGCAAGGC CCTGGAGGAC GCCAATGTCG CCGAGGCCGA GGTCCGCGAG GCCAAGGCCT CTCTGCTGCC GCAGCTGAAC CTGGAGGCCA GCGCGCTGCG CCGGGAGATC GGTGGGCATC CGGAGAGCGA CTCGGTGGTA TCCCTGCGCT TCCGCATGGA TACCTTCCAG GGGCTTTCCA ACTTCCGCCG GCCGACCGCC GCGCAGCAGC GCCTGGAGTC GGCGAAATGG ACCGCCGACG CGATGCAGCG CGACATCCGC CGGCAACTGC AGAACCTCTT CGACAACGGC GACACGCTGC GCTGGCGGGA ACAGTCGTTG ACCCAGCAGG TGACCGAGTC GGAGCAGGTC GGCGAGCTCT ATCGCGAGCA GTTCGAGGTC GGCCGGCGCG ACGTGATCGA CCTGCTCAAC GTGCAGCGCG AGCGCTTCGA GGCGGAGCGG CAACTGATCA ACCTGCGTAT CGAACGCAAG CGCATCGAGT ATCGGGCGGC CGCGCAAGTC GGCCTGTTGG GTCCGCTATT GGAGAACCGG CTGAATCATG GAAGCTGA
|
Protein sequence | MRGRRQYARK GRRCGKGAIW LLSLGLPMFA PAMPLDQAVR AGLAIHPEVR SAMAEADRAG TEVEMAKGGY YPSVTMSGGP QEFDFGEIVY DLTASQMLYD WGRVTSKVDS ASATQRKLSE AVLVARDDAA LDIVETYLDV LASERRVEAV RAHIQRLDGI REMTQARGGD GYADRSELDR ANLELARAQE QLSLEKGNLQ DARNQYAILV GQEPADLVEP EPMSLQRYLA ASDMARVIRE SPLQRKALED ANVAEAEVRE AKASLLPQLN LEASALRREI GGHPESDSVV SLRFRMDTFQ GLSNFRRPTA AQQRLESAKW TADAMQRDIR RQLQNLFDNG DTLRWREQSL TQQVTESEQV GELYREQFEV GRRDVIDLLN VQRERFEAER QLINLRIERK RIEYRAAAQV GLLGPLLENR LNHGS
|
| |