| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3410 |
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| Symbol | |
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| ID | 5357720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 3528188 |
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| End bp | 3530329 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640812461 |
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| Product | putative ABC transporter ATP-binding protein/permease |
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| Protein accession | YP_001348770 |
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| Protein GI | 152989085 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.277715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCCTCA ACCACGACCC CGTCGTCGAC CCGTTGCGCC AGGGCCTGTT GCTGCTCTGC
CGGCAGCTCG GCCGGCCGCT CGGCGACGCC GAGCTGGTGG ACGGCATGCC GCTGGAACAC
GGCCGCCTGC CGTTGCACCT GGTGGCCCGC GCGCTGCGCC GGGCCGATAT CACCGCCCGG
GTCGAGCGGC AGCCGCTGCG GCGGATCGAC GCCTACCTGC TGCCGGCCCT GCTGTTGCTC
GACGATGGCG GCAGCCTGGT GCTGGTCGGC AACGACGGCG AGCACGCCGA GGTGCTGGTG
CCGCAGAGCG ACGGCGGCCG CGAACGCCTG CCGCTGCGCG AGCTGGAGGC GCTCTACAGC
GGCACGGCGA TCTTCGCCAA GTGCCGCTAC CGGCCGGACG GGAGGGTTGG CGACTATGCC
AGCGCCTTGC CCGAACACTG GTTCTTCGGC CCGCTCAAGC GCCTCTGGCG CTCCTATGCC
GAGGTTACCG CCGCGGCTCT GATGGCCAAC GTCCTGGCGG TGGCCTCGGC GCTGTTCGCC
ATGCAGGTCT ACGACCGCGT GGTGCCCAAC GCGGCGTTCG ACACCCTGTG GATCCTGGCC
AGCGGCGTGG CCCTGGCGAT CGTCCTCGAC GGCGTGCTAC GGATCATGCG CGGGCATCTG
CTCAACGTGC TCGGCAAGCG CCTCGACCTG CAGCTCTCGA CACTGTTGTT CTCCCGCGTA
CTGAGCACGC GCATCGCCGC CAAGCCGGCG TCGATGGGCG CCTTCAGTAC CCAGGTGCGG
GAGTTCGAGT CGGTGCGCGA GTTCTTCACC TCGTCCAGCG CGGCGCTGAT CAGCGACCTG
CCGTTCGTGG CGATCTTCCT GCTGATCATC GCGCTGATCG GCGGCCACGT GGTCTGGGTG
CCGCTGGTGG CCTGCGTGCT GATGGTCCTG CCGGGACTGC TGACCCAGCG CCTGCTCGGC
CACCTGTCGC GACAGAACCT GCGCGAGGGG GCGATGAAGA ACGGCGTGCT GCTGGAAGCC
TTCGAGCATC TGGAGACGGT CAAGGCGACC CGCGCCGAGG GTCGTTGCCT GCACCAGTGG
GAAAGCCTGA CCGGCGAGCT GGCCGGCACG GCGATGAAGA CCCATACCCT GGCCTCGACC
CTGAGCTACC TGGCGGGCAT CGTCCAGCAA CTCTGCTACG TCGGCGTGGT GGTGTTCGGC
GTCTATCGGA TCAGCGAGGG CGCGATGACC GTCGGCGCCC TGGTCGCCTG TTCGATCCTC
GCCTCGCGGG CCATCGCGCC GCTGTCGCAG GCGGCCGGCA TCCTCGGCCG CTGGCAGCAC
ACCAAGGTGG CGATGGAAGG CCTCGACCAA CTGATGAGCG CCGAGCAGGA GCGGCCCAAG
GGCAAGCGCT TCGTGCACAA GGAGCGCCTG CTGGGAAACT ATCGCCTGGA AGGCGTGCGC
CTGGCCCACG GCGACAGTCC ACCGGTGGTC GACGTGCAGG CACTGGGCAT CCGCGCCGGC
GAGCGGGTGG CGCTGCTCGG CGGCAACGGC GCCGGCAAGT CGACCCTGCT GCGCCTGCTC
AGCGGCCTGC TCGACATGCA GTCGGGCCGC CTGCTGCTGG ACGACGTCAG CCTGACCCAG
ATCGACCCGG CCGACCGCCA GCGTGGCATC GGCTACCTGC CGCAGGACGT GGCGCTGTTC
CATGGCAGCC TGCGCGACAA CCTCAACCTG GAGAACGCCG CGCTGAGCGA CGAGGAACTG
CTGGGAACCC TCGACGGGGT CGGCCTGGGC GCCTTCGTCC GCGGCCACCC GCTGGGCCTG
GACATGCCGA TCCAGGGCAA CGCCAGCCTT TCCGGCGGCC AGCGCCAGGC CGTCGGGCTG
GCCCGGGTAC TGTTGCAGGA TCCGCCGATC CTGCTGCTCG ACGAGCCGAC CGCCGCCTTC
GACCAGACCA GCGAGAAGCA GGTCATCGAC TACCTGCAGC AATGGCTGGG CAAGCGCACC
CTGGTTATCA CCACCCACAA GAAAAGCATG CTCGCCCTGG TCGAGCGCGC GGTGGTCCTG
CGCCAGGGCA GGGTGATCAT GGACGGCCCG CTGGAACAGG TGGTGCAGGG CAACCAGGTA
CAGGCGCCGC AGGCCGCCGA AGGAGGCAAC CATGGAATCT GA
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| Protein sequence | MILNHDPVVD PLRQGLLLLC RQLGRPLGDA ELVDGMPLEH GRLPLHLVAR ALRRADITAR
VERQPLRRID AYLLPALLLL DDGGSLVLVG NDGEHAEVLV PQSDGGRERL PLRELEALYS
GTAIFAKCRY RPDGRVGDYA SALPEHWFFG PLKRLWRSYA EVTAAALMAN VLAVASALFA
MQVYDRVVPN AAFDTLWILA SGVALAIVLD GVLRIMRGHL LNVLGKRLDL QLSTLLFSRV
LSTRIAAKPA SMGAFSTQVR EFESVREFFT SSSAALISDL PFVAIFLLII ALIGGHVVWV
PLVACVLMVL PGLLTQRLLG HLSRQNLREG AMKNGVLLEA FEHLETVKAT RAEGRCLHQW
ESLTGELAGT AMKTHTLAST LSYLAGIVQQ LCYVGVVVFG VYRISEGAMT VGALVACSIL
ASRAIAPLSQ AAGILGRWQH TKVAMEGLDQ LMSAEQERPK GKRFVHKERL LGNYRLEGVR
LAHGDSPPVV DVQALGIRAG ERVALLGGNG AGKSTLLRLL SGLLDMQSGR LLLDDVSLTQ
IDPADRQRGI GYLPQDVALF HGSLRDNLNL ENAALSDEEL LGTLDGVGLG AFVRGHPLGL
DMPIQGNASL SGGQRQAVGL ARVLLQDPPI LLLDEPTAAF DQTSEKQVID YLQQWLGKRT
LVITTHKKSM LALVERAVVL RQGRVIMDGP LEQVVQGNQV QAPQAAEGGN HGI
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