Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3386 |
Symbol | |
ID | 5356015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 3505267 |
End bp | 3505980 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640812437 |
Product | putative transcriptional regulator |
Protein accession | YP_001348746 |
Protein GI | 152985537 |
COG category | [K] Transcription |
COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.247592 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTGATG AGAGAGAGGG ATATCTCGAG ATTTTGTCAA GAATAACGAC CGAGGAAGAG TTCTTTTCCC TGGCGCTCGA GATATGCGGG AATTATGGTT TCGAATTCTT TTCATTCGGT GCGCGGGCGC CTTTCCCCTT GACCGCCCCC AAATATCATT TTCTGTCGAA CTATCCAGGA GAGTGGAAAA GCAGATATAT CTCCGAGGAC TACACGTCCA TCGATCCGAT CGTTCGCCAT GGTCTGCTGG AATACATGCC GCTGATCTGG AACGGCGAGG ACTTCCAGGA AAACCGCTTC TTCTGGGAGG AGGCGCTGCA CCATGGCATC CGCCACGGCT GGTCGATTCC CGTGCGCGGC AAGTACGGCC TGATCAGCAT GTTCTCCCTG GTGCGCTCGG CCGAGAGCAT CGCGGCCGCG GAGATCCTCG AGAAGGAATC CTTCCTGCTC TGGATCACCA GCATGCTGCA GGCCACCTTC GGCGACCTGC TGGCGCCGCG CATCGTCCCG GAAAGCAACG TGCGCCTGAC CGCCCGGGAA ACCGAGATGC TCAAATGGAC CGCGGTCGGC AAGACCTACG GCGAGATCGG CCTGATTCTT TCCATCGACC AGCGCACGGT GAAGTTCCAT ATCGTCAACG CCATGCGCAA GCTCAACTCC AGCAACAAGG CGGAGGCCAC CATGAAGGCC TACGCCATCG GCCTGCTCAA CTGA
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Protein sequence | MRDEREGYLE ILSRITTEEE FFSLALEICG NYGFEFFSFG ARAPFPLTAP KYHFLSNYPG EWKSRYISED YTSIDPIVRH GLLEYMPLIW NGEDFQENRF FWEEALHHGI RHGWSIPVRG KYGLISMFSL VRSAESIAAA EILEKESFLL WITSMLQATF GDLLAPRIVP ESNVRLTARE TEMLKWTAVG KTYGEIGLIL SIDQRTVKFH IVNAMRKLNS SNKAEATMKA YAIGLLN
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