| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3365 |
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| Symbol | nrdD |
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| ID | 5357191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 3484131 |
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| End bp | 3486158 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640812416 |
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| Product | anaerobic ribonucleoside triphosphate reductase |
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| Protein accession | YP_001348725 |
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| Protein GI | 152987792 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.172417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAGC CCCGGAAGGC TTCCTCGCCG GCCACCCTGC TCAAGCGCAA CGGACGTGAA
GTCCCGTTCG ATCCCGGCAA GATCGAACGC GCCATCGCCG CCGCCGGCCA GGCGACCGGC
GAACTGGACT CGCGGCAGGC GCAGGCGCTC GCCGAGCGCG TGGTGGAGCG CCTGCCGGAG
CGCGCCTGCC TGGATATCGA ACGGGTCCAG GACCTGGTCG AACGGGTGCT GATGGAGGCC
GGCCACTATC CCACCGCACG CGCCTACGTG GTCTACCGCG AACGCCACGG CCGGCTGCGG
CGCGAGCGCA GGAGCCTGGT GGACGTCGCC GCGTCGATGA ACGAGTACCT CTCGCAGGAG
GACTGGCGGG TACGCGCCAA CGCCAACCAG GGCTACTCCC TCGGTGGCCT GATCCTCAAC
GTGTCGGGCA AGGTCACTGC CAACTACTGG CTCGACGAGG TCTACGACGC CGAGGTCGCC
GCCGCCCACC GCGACGCCGA CCTGCACATC CACGACCTCG ACATGCTCGC CGGCTACTGC
GCCGGCTGGT CGCTGCGCAC CCTGCTGAAC GAAGGCCTGA ACGGCGTGCC GGGGCGGGTC
GAGGCCGGGC CGCCGAAGCA CCTGGGCAGC GCCCTGGGGC AGATGGTCAA TTTCCTCGGT
ACCCTGCAGA ACGAATGGGC CGGCGCCCAG GCCTTCAGCT CCTTCGACAC CTACCTGGCG
CCCTACGTAC GCAAGGACCG CCTCGACTAT CCCGGCGTGC GCCAGGCGCT CCAGGAGTTC
ATCTACAACC TCAACGTACC GTCGCGCTGG GGCACCCAGA CGCCCTTCAC CAACCTGACC
TTCGACTGGG TCTGCCCGGA GGACCTGCGC GACCAGGTGC CGCGCATCGG CGGCGAGGAA
ATGCCCTTCG CCTATGGCGA TTTGCAGGCC GAGATGGACC TGATCAACCG CGCCTACATC
GAGGTGATGC AGGCCGGCGA CGCCCACGGC CGGGTGTTCA CCTTCCCGAT CCCGACCTAC
AACATCACCC ACGACTTCCC CTGGGACAGC GACAACGCCA CGCGCCTGTT CGAGATGACC
GCGCGCTATG GCCTGCCCTA TTTCCAGAAC TTCCTCAACT CGGACATGCA GCCCAACCAG
GTGCGCTCCA TGTGCTGTCG CCTGCAACTG GACGTGCGCG AGTTGCTCAA GCGCGGCAAC
GGCCTGTTCG GCTCGGCGGA GCAGACCGGC TCGCTGGGCG TGGTGACGCT CAACTGCGCG
CGCCTGGGCT ATCGCCACCG TGGCGACGCC GCCGGCCTCT ACCGCCAGCT CGACCACCTG
CTCGAACTCG CCTTCGCCAG CCTGGAGCTG AAGCGCAAGG TGATCCAGCA GCACATGGAC
GCCGGCCTCT ATCCCTACAC CCGGCGCTAC CTGGGTACCC TGCGCAACCA TTTCTCCACC
ATCGGGGTGA ACGGCCTGCA CGAGATGCTG CGCAACTTCA GCGACGACCG CGAGGGACTG
CACAGCGAAG CCGGGCGTGA GATGGCCCTG GCCCTGCTCG ACCACGTGCG CGCCCGCCTG
GTGGGTTTCC AGGAAGACAG CGGACACCTC TACAACCTGG AAGCCACCCC CGCCGAAGGC
ACCACCTACC GCTTCGCCCG CGAGGACCGC AAGCGCCATC CGGACATCCT CCAGGCCGGC
ACCGCGCAGG CCCCCTACTA CACCAACTCC TCGCAACTGC CGGTGGGCTT CACCGACGAT
CCGTTCGAAG CCCTGGAACT GCAGGACGCC CTGCAATGCA AGTACACCGG CGGCACCGTG
CTGCACCTGT ACATGGCCGA GCGGATATCC TCGGCGGAGG CCTGCAAGAC CCTGGTGCGC
AACGCCCTCG GGCGCTTCCG CCTGCCCTAC CTGACCGTCA CCCCGACCTT CTCGATCTGC
CCGCGGCACG GCTACCTGGC CGGCGAGCAT GAGTTCTGCC CGAAGTGCGA CGAGGAACTG
CTGCGCCGCG CGGGCGCCAG GAGTTGCTGC GGCGGCTGTG GCGGTTGA
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| Protein sequence | MTQPRKASSP ATLLKRNGRE VPFDPGKIER AIAAAGQATG ELDSRQAQAL AERVVERLPE
RACLDIERVQ DLVERVLMEA GHYPTARAYV VYRERHGRLR RERRSLVDVA ASMNEYLSQE
DWRVRANANQ GYSLGGLILN VSGKVTANYW LDEVYDAEVA AAHRDADLHI HDLDMLAGYC
AGWSLRTLLN EGLNGVPGRV EAGPPKHLGS ALGQMVNFLG TLQNEWAGAQ AFSSFDTYLA
PYVRKDRLDY PGVRQALQEF IYNLNVPSRW GTQTPFTNLT FDWVCPEDLR DQVPRIGGEE
MPFAYGDLQA EMDLINRAYI EVMQAGDAHG RVFTFPIPTY NITHDFPWDS DNATRLFEMT
ARYGLPYFQN FLNSDMQPNQ VRSMCCRLQL DVRELLKRGN GLFGSAEQTG SLGVVTLNCA
RLGYRHRGDA AGLYRQLDHL LELAFASLEL KRKVIQQHMD AGLYPYTRRY LGTLRNHFST
IGVNGLHEML RNFSDDREGL HSEAGREMAL ALLDHVRARL VGFQEDSGHL YNLEATPAEG
TTYRFAREDR KRHPDILQAG TAQAPYYTNS SQLPVGFTDD PFEALELQDA LQCKYTGGTV
LHLYMAERIS SAEACKTLVR NALGRFRLPY LTVTPTFSIC PRHGYLAGEH EFCPKCDEEL
LRRAGARSCC GGCGG
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