| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3354 |
|---|
| Symbol | |
|---|
| ID | 5358409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 3467766 |
|---|
| End bp | 3469970 |
|---|
| Gene Length | 2205 bp |
|---|
| Protein Length | 734 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640812405 |
|---|
| Product | putative hydroxylase large subunit |
|---|
| Protein accession | YP_001348714 |
|---|
| Protein GI | 152989303 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCC TGCCACACAG CACCGGGCAA GCCCTGGATC GCGTCGACGG TCCGGCCAAG
GTCACCGGCC AGGCCCGCTA CGCCGCCGAA TATCCCGCCG CCGATCTGCT CCACGGCAGC
GTGGTCAGCA GCCACGTCGC CCGCGGCCGG GTGCGCGGCA TCGACTGTGC GGCGGCGCTG
GCGGTTCCCG GGGTGGTCGC GGTGCTGCAC CACCTGAACC GGCCGCCGAT GGCGGGCGAC
GCCGAGCCCT ACAAGGACGC CGATGCCGCC GAAGGCGAAC CCTTCCGCCC GCTGTTCGAC
GACCGCGTCC TGTACAGCGG CCAGCCCCTC GCCCTGGTCC TGGCACGGAG CCTGGAACTG
GCCCGCCACG CGGGCTCGCT GCTACGCATC GATATCGAGC CCGAGCCGCA CCAGACCGAC
CTGCTGGCCG CCCTCGACCA GGCCCATGAG GCTCCCGCCG AACTGCCCGC CGAGCGCGGC
GATTTCCAGC GCGCCTATCA CTCCGCGCCG GTTCGTATCG ACGCGAGCTA CAGCACGCCG
AGCGAGCACC ACAATCCCAT GGAGCCGCAT GCGTCCACGG TCATCGTCCA GCCCGACGGC
AGCCTGCTGG TGCACGACAA GACCCAGGGG ACGCAGAACA GCCAGGCCTA CCTGCAAAAG
GTCTTTGGCC TGCCCGGCGA CAAGGTAAGG GTCTGTGCCG CCTACGTCGG CGGCGCCTTC
GGCTCCGGCC TGCGCCCGCA ATACCAGTTG GCCCTGGCGG TGATGGCGGC GCTGCAACTG
CGGCGGTCGG TGCGCGTAGT GCTGACCCGC CAGCAGATGT TCAGTTTCGG CTACCGGCCG
CGCACCCTGC AGCGCCTGCG ACTGGGCGCC GATGCCGAGG GGCGCCTGCT CGCGCTGGGC
CACCAGGCGA CAGCGCAGAC CTCGCGCTTC GAAGACTTCA CCGAGCACGT GGTGGAGTGG
AGCGGCATGC TCTACCGCTG CGAGAACCTT TCCCTGGCCT ACCGCCTGGT GCCGCTGGAC
GTCTATACCC CGCTGGACAT GCGCGCCCCC GGCGCGGCGC TGGGGCTGAT CGGGCTGGAA
TGCGCGATGG ACGAACTGGC GGTGCGGCTC GGCATGGATC CGATCGCGCT GCGCCGGATC
AACTTCGCCG AGCGCAACGG CAACGAGGAC AAGCCGTACT CCAGCAAGGC GCTGCTGGCC
TGCTACGAGG AAGGCGCCCG GCGCTTCGGC TGGCAGGCCC GCGACCCACG GCCACGGAGC
ATGAGCGAGG GGCGCCGGTT GCTCGGCTGG GGCATGGCCG GCGGCGTCTG GGAGGCCATC
CAGGGCAAGG CCAGCGCCAG GGCGCGGCTG GAGGCGGACG GCCTGCTGCG GGTGGCCAGC
GCGACCACCG ATATCGGCAC CGGCACCTAC ACGGTGATGA CCCAGATCGC CGCCGACGCC
GCCGGCATGG CGCCGGAAGA GGTGCGCTTC CAGCTTGGCG ACAGTGCGTT GCCGAAGGCC
CCGTTGCAGG GCGGTTCGTC CACCGTCTCT TCGGTCGGTT CCGCCGTCCG CCTGGCCTGC
CTGCGCCTGC GCCAGGCCCT GGTCGCCCAT GCCAGGGCCC GCCATCCGGA ACTGGCCGGC
GCCGCCGAAG AGCGCTTCCG CATATGCCGG GGCCACCTGG AAGCGGGCGA TACGCGATAC
GCCCTGGCCG ACCTGCTGCA AGGGCTGCCG GACGACGCGT TGCAGGTGGA GGTGGAAGCT
GAACCCTCGG CGCGGCGCGA AGGCTACGCC AGCGCGAGCC ATTCGGCAGT GTTCGTCGAG
GTGCGCGTCG ACGAAGCCCT CGGCAGCCTG CGCGTGAGCC GGGTGGTCAG CGCGGTGGCG
GCGGGGCGGG TGATCAACCC GAAGACCGCG CGCAGCCAGA TCCTCGGCGG GGTGGTCTGG
GGCCTGGGCA TGGCCTTGCA GGAGGAAACC CAGGTCGACC ATGCGCTGGG CCGCTGCATG
AACCACAACC TCGCCGAGTA CCACATCCCG GTGAACGCCG ATATCGGCGA TATCGAGGTG
ATCTTCGTCG ACGAGCCCGA CGCTATCGTC AACGAACTGG GCTCCAAGGG CGTCGGCGAA
ATCGGCATCG TCGGCGTCGC CGCCGCGGTG GCCAACGCCG TGTACCACGC CACCGGCCGC
CGCCTGCGCG ACTTCCCGCT GACCGTCGAC AAGCTGCTTG GCTGA
|
|---|
| Protein sequence | MSSLPHSTGQ ALDRVDGPAK VTGQARYAAE YPAADLLHGS VVSSHVARGR VRGIDCAAAL
AVPGVVAVLH HLNRPPMAGD AEPYKDADAA EGEPFRPLFD DRVLYSGQPL ALVLARSLEL
ARHAGSLLRI DIEPEPHQTD LLAALDQAHE APAELPAERG DFQRAYHSAP VRIDASYSTP
SEHHNPMEPH ASTVIVQPDG SLLVHDKTQG TQNSQAYLQK VFGLPGDKVR VCAAYVGGAF
GSGLRPQYQL ALAVMAALQL RRSVRVVLTR QQMFSFGYRP RTLQRLRLGA DAEGRLLALG
HQATAQTSRF EDFTEHVVEW SGMLYRCENL SLAYRLVPLD VYTPLDMRAP GAALGLIGLE
CAMDELAVRL GMDPIALRRI NFAERNGNED KPYSSKALLA CYEEGARRFG WQARDPRPRS
MSEGRRLLGW GMAGGVWEAI QGKASARARL EADGLLRVAS ATTDIGTGTY TVMTQIAADA
AGMAPEEVRF QLGDSALPKA PLQGGSSTVS SVGSAVRLAC LRLRQALVAH ARARHPELAG
AAEERFRICR GHLEAGDTRY ALADLLQGLP DDALQVEVEA EPSARREGYA SASHSAVFVE
VRVDEALGSL RVSRVVSAVA AGRVINPKTA RSQILGGVVW GLGMALQEET QVDHALGRCM
NHNLAEYHIP VNADIGDIEV IFVDEPDAIV NELGSKGVGE IGIVGVAAAV ANAVYHATGR
RLRDFPLTVD KLLG
|
|---|
| |