| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3280 |
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| Symbol | hmgA |
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| ID | 5353977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 3394772 |
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| End bp | 3396070 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640812331 |
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| Product | homogentisate 1,2-dioxygenase |
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| Protein accession | YP_001348640 |
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| Protein GI | 152985474 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.645052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTCG ACTCCACTGC CCTCGCCTAT CAATCGGGCT TCGGCAACGA ATTCAGCAGC
GAAGCGCTCC CCGGCGCCCT GCCGGTCGGC CAGAACTCCC CGCAGAAAGC GCCCTACGGC
CTGTACGCCG AACTGCTCTC CGGCACCGCT TTCACCATGG CTCGCAGCGA GGCCCGGCGC
ACCTGGCTGT ACCGCATCAC GCCGTCGGCC AAGCATCCAC CGTTCCGCCG CCTGGAACGA
CAGATCGCCG GTGCCGAGCT GGATGCGCCG ACTCCCAACC GCCTGCGCTG GGACCCGCTG
GCATTGCCCG AGCAACCCAC CGACTTCCTC GACGGCCTGC TGCGCATGGC CGCCAACGCG
CCCGGCGACA AGCCGGCCGG CGTGAGCATC TACCAGTACC TGGCCAACCG CTCGATGGAG
CGTTGCTTCT ACGACGCCGA TGGCGAACTG CTGCTGGTCC CGCAGTTGGG CCGCCTGCGC
CTGTGCACCG AACTCGGCGC GCTGCAGGTC GAGCCGCTGG AGATCGCGGT GATCCCGCGC
GGGATGAAGT TCCGCGTCGA GCTGCTCGAC GGCGAGGCGC GCGGCTATAT CGCCGAGAAC
CACGGCGCGC CGCTGCGCCT GCCCGACCTC GGGCCGATCG GCAGCAACGG CCTGGCCAAT
CCGCGCGATT TCCTGGCCCC GGTGGCGCGC TACGAGGACA GCCGCCAGCC GCTGCAACTG
GTGCAGAAAT ACCTCGGCGA GCTGTGGGCC TGCGAGCTCG ACCATTCGCC GCTGGACGTG
GTCGCCTGGC ACGGCAACAA CGTGCCCTAC AAATACGACC TGCGCCGCTT CAACACCATT
GGCACGGTCA GCTTCGACCA CCCGGACCCG TCGATCTTCA CCGTGCTGAC CTCCCCCACC
AGCGTCCACG GCCTGGCCAA CATCGACTTC GTGATCTTCC CGCCGCGCTG GATGGTGGCC
GAGAACACCT TCCGCCCGCC GTGGTTCCAC CGCAACCTGA TGAACGAGTT CATGGGCCTG
ATCCAGGGCG CCTATGACGC CAAGGCCGGC GGCTTCGTGC CCGGCGGCGC CTCGCTGCAC
AGTTGCATGA GCGCCCACGG CCCGGACGCG GAAAGCTGCG ACAAGGCCAT CGCCGCCGAC
CTCAGGCCGC ACAGGATCGA CCAGACCATG GCCTTCATGT TCGAGACCAG CCAGGTCCTC
CGGCCGAGCC GTGCCGCCCT CGAGACGCCG GCCCTGCAGA ATGACTACGA TGCCTGCTGG
GCGTCGCTCG TATCCACCTT CAACCCGCAA CGGAGATAA
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| Protein sequence | MNLDSTALAY QSGFGNEFSS EALPGALPVG QNSPQKAPYG LYAELLSGTA FTMARSEARR
TWLYRITPSA KHPPFRRLER QIAGAELDAP TPNRLRWDPL ALPEQPTDFL DGLLRMAANA
PGDKPAGVSI YQYLANRSME RCFYDADGEL LLVPQLGRLR LCTELGALQV EPLEIAVIPR
GMKFRVELLD GEARGYIAEN HGAPLRLPDL GPIGSNGLAN PRDFLAPVAR YEDSRQPLQL
VQKYLGELWA CELDHSPLDV VAWHGNNVPY KYDLRRFNTI GTVSFDHPDP SIFTVLTSPT
SVHGLANIDF VIFPPRWMVA ENTFRPPWFH RNLMNEFMGL IQGAYDAKAG GFVPGGASLH
SCMSAHGPDA ESCDKAIAAD LRPHRIDQTM AFMFETSQVL RPSRAALETP ALQNDYDACW
ASLVSTFNPQ RR
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