| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3262 |
|---|
| Symbol | |
|---|
| ID | 5358256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 3373272 |
|---|
| End bp | 3374273 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640812313 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001348622 |
|---|
| Protein GI | 152987791 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0385] Predicted Na+-dependent transporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.528574 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGAC CGCGTTTCCT TCCGGATAAC TTCACCCTGG CGCTGATCGC CACCGTCCTG
CTCGCTACCT TCCTGCCCTG TAGCGGCCAG ACCGCCGTGG TCTTCGAATG GGTGACCAAC
ATCGGCATCG GCCTGCTGTT CTTCCTCCAC GGCGCCAAGC TGTCGCGCCA GGCGATCATC
GCCGGCATGA CCCACTGGCG CCTGCACCTG CTGGTGTTCG CCTGCACCTT CGTGATGTTC
CCGCTGCTCG GCCTGGCGCT GAAACCGGCG CTGTCGCCGA TGGTCACACC GGAGCTGTAC
CTCGGCATCC TGTTCCTCTG CGCCCTGCCG GCCACCGTGC AATCTTCCAT CGCCTTCACC
TCGCTGGCCC GCGGCAACGT GCCGGCGGCG GTCTGCAGCG CCTCGGTATC GAGCCTGCTC
GGGGTGTTCC TCACCCCGCT GCTGGTCAAG CTGCTGCTCG GCGCCGAGGG CGAGACCGGC
AACGCACTGG ACGCCATCGG CAAGATCACC CTGCAACTGC TGGTACCGTT CATCGCCGGC
CAGGTCCTGC GGCGCTGGAT CGGCGCCTGG GTGGAGCGCA ACAAGCCGGT GCTGCGCTAT
GTCGACCAGG GCTCGATCCT GCTGGTGGTC TATACCGCCT TCAGCGCGGC GGTGATCCAG
GGCCTGTGGC ATGAAGTGCC CTGGCTGGCG CTGATCGGCC TGACCGTCGC CTGCTGCGTG
ATCCTCGCCC TGGCCCTGGT GCTGACCACG GTGCTGGCGC GGCGCCTGGG TTTCAGCAAG
GAAGACGAGA TCACCATCGT CTTCTGCGGT TCGAAAAAGA GCCTGGCCAC CGGCGTGCCC
ATGGCCAAGG TGCTGTTCGC CACCAGCGCG GTGGGACCGA TGGTGCTGCC GCTGATGCTG
TTCCATCAGA TCCAGCTGAT GGTCTGTGCG GTGCTCGCTC AGCGCTACGC CAGGCGCCGC
GATGACGCAG CGGCGGTGCT GGCGGAAGCA TCCTCGCGCT GA
|
|---|
| Protein sequence | MSRPRFLPDN FTLALIATVL LATFLPCSGQ TAVVFEWVTN IGIGLLFFLH GAKLSRQAII
AGMTHWRLHL LVFACTFVMF PLLGLALKPA LSPMVTPELY LGILFLCALP ATVQSSIAFT
SLARGNVPAA VCSASVSSLL GVFLTPLLVK LLLGAEGETG NALDAIGKIT LQLLVPFIAG
QVLRRWIGAW VERNKPVLRY VDQGSILLVV YTAFSAAVIQ GLWHEVPWLA LIGLTVACCV
ILALALVLTT VLARRLGFSK EDEITIVFCG SKKSLATGVP MAKVLFATSA VGPMVLPLML
FHQIQLMVCA VLAQRYARRR DDAAAVLAEA SSR
|
|---|
| |