| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3259 |
|---|
| Symbol | |
|---|
| ID | 5359264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 3372122 |
|---|
| End bp | 3372595 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640812310 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_001348619 |
|---|
| Protein GI | 152984479 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0640404 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATTT CATTGGATGC ATACGATCAG CGTATTCTTG CGCTATTGCA GGAGGAATCC
TCGCTGTCCA CTGCCGAGAT CGCCGAGCGT ATCGGACTTT CCCAATCGCC CTGCTGGCGG
CGCATCCAGC GCCTGAAGGA GGAGGGGGTG ATCCGCAAGC AGGTGACCCT GCTCGACCGC
AAGAAGATCG GCCTGAATAC CCAGGTATTC GCCCAGATCA AGCTCAACGC CCATGGGCGC
AAGAACCTCA CCGACTTCGC CGAGGCGATG CACCAGTTTC CCGAGGTGCT GGAGTGCCAC
GTACTGATGG GCGCGGTGGA CTTCATGCTG CGCATCGTCA CCCGCGACAT CGAGTCCTAT
GAACGCTTCT TCTTCGAGAA GCTGTCGGCG GTACCGGGTA TCCAGGAGGT CAACTCCATC
GTCGCCCTGT CGGAAATCAA GTCCACCACT ACCTTGCCTC TGCTCGCCCC CTGA
|
|---|
| Protein sequence | MSISLDAYDQ RILALLQEES SLSTAEIAER IGLSQSPCWR RIQRLKEEGV IRKQVTLLDR
KKIGLNTQVF AQIKLNAHGR KNLTDFAEAM HQFPEVLECH VLMGAVDFML RIVTRDIESY
ERFFFEKLSA VPGIQEVNSI VALSEIKSTT TLPLLAP
|
|---|
| |