| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3227 |
|---|
| Symbol | |
|---|
| ID | 5355311 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 3337513 |
|---|
| End bp | 3339237 |
|---|
| Gene Length | 1725 bp |
|---|
| Protein Length | 574 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640812278 |
|---|
| Product | carbamoyl transferase |
|---|
| Protein accession | YP_001348587 |
|---|
| Protein GI | 152984380 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2192] Predicted carbamoyl transferase, NodU family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.160172 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCATTC TCGGCATCAC CAACAACGAC CTCGCCGGCG CCTGCCTGGT CCGCGACGGC
CGGATCGTCG CCGCCGCCAG CGAGGAACGC TTCACCCGCC AGAAGGACCA CAAGACCTGG
CCGGGCCGCT CCATCGACTA CGTGCTCGGC GAGGCCGGCG TCGAGCTGGC CGCCGTCGAC
CGCGTCGCTT ATGGCTGGAA TGCCGGGTTC GACGCCGACC GCCACCTGGA CCTCTATCTC
GACCGGGTCC TCGAGGAAGC CCGCGAACGC CCCGAAGGCC TGGCACACCT GCGCAAGCGC
ATCGCCGACG AACGGGCCAA CGACAAGGCC AAGCGCGGCG AATTCGATGC CTTCATCCGC
GCCAACGGCC TGCGCGGCAA GGTCGAGTAC ATCGACCATC ATGAATGCCA CGCCCTCGGC
GCGTTCGTCT GCTCGCCGTT CGACCAGGCG CTGACCCTCA CCTGCGACGG CCGCGGCGAC
TTCCAGTCGC TGACCGTCAC CCACTACCGC GCCGACGGCG GCGAGGCGGT CCTGCAGCGC
GAGACCAGCG TCGACAGCCT GGGCTATTTC TACGGACGCA TCACCCGCCT GCTCGGCTTC
AAGCCGAACC GCCACGAAGG CAAGATCACC GGCCTGGCCG CCTTCGGCGA CGCGGAAAAG
CTGCTGCCGC TGATGAACGA CATGATCCGC CTGGAGAACG GCCGCCTGCG CGCCCGCTGC
GGCGAACTGT ACCTGCCCTC CTACGACGGC TACAGCGACC CGCTGCTGCA ACGCTGCGCG
GCGGAGCGCC CGGCCGACGT CGCCGCCGCC GCGCAGCGGC ATTCCGAAGA CCTGCTGGTG
GCGATCGCCC GCGAACACGT GGCGCGCACC GGCTGCGCCA ACCTGTGCCT GGCCGGCGGG
GTGTTCGGCA ATGTCAAGCT GAACCAGCGC CTGCGCGAGA TCCCCGGGGT CCGCGATGTC
TACGTGCTGC CCTGCATGGG CGACGGCGGC CTGGCCCTGG CCGCCGCGGT GGCGGTTGCC
TACCGCGAGC AGGGCACGCG CTTCCCGGCG CCGAGCATGG CCCTCGGCCC GGACGCGCGC
AGCGCCGCGC AGAATGCCGA GCTGATCGCC AGCCAGTACC CGCGCCTGGC CTACAGCCGG
CCGGCCAACC TGATCGAGAC GCTGGTCGAG GCACTGCGGG AAAACCAGGT GCTGGGCATG
TTCAAGGGCC GCATGGAGTT CGGTCCGCGC GCGCTCTGCA ACCGCAGCAT CGTCTATCAC
GCCGGCGACA CCACGGCCAA CGACTGGCTC AACGAACGCA TGGAACGCAC CGAGTTCATG
CCGTTCGCCC CGGTCACCGC GGTGGAGCAC GCCGAGGCTT GCTACGTCGG TTGGCGCGAA
GACCAGGTGG CGGCCGACTA CATGACCATG ACCTACGACT GCCATGCGGA TTTCCGCGAG
CGCTGCCCGG CGGTGGTCCA TGTCGACGGC ACCGCGCGGC CACAGATCAT CCGTCCGCAG
GCCGATCCGT TCATGCATGC CTTGCTGCAT GCCTGGCATG CCCGCAGCGG CCAGCCGGCG
CTGATCAATA CGTCCTTCAA CCGCCACGAG GAACCGATCG TCTGCGCCCC GCAGGATGCC
CTCGGCGCGC TGGAGGACGG CATGGTCGAC CTGGTGGTGC TCGGCGAATC CCTGCTGGTC
TGGCGCAAGG GCGAGAACGC CTTCGCCAGG GCGCGCTTCG AGTGA
|
|---|
| Protein sequence | MIILGITNND LAGACLVRDG RIVAAASEER FTRQKDHKTW PGRSIDYVLG EAGVELAAVD
RVAYGWNAGF DADRHLDLYL DRVLEEARER PEGLAHLRKR IADERANDKA KRGEFDAFIR
ANGLRGKVEY IDHHECHALG AFVCSPFDQA LTLTCDGRGD FQSLTVTHYR ADGGEAVLQR
ETSVDSLGYF YGRITRLLGF KPNRHEGKIT GLAAFGDAEK LLPLMNDMIR LENGRLRARC
GELYLPSYDG YSDPLLQRCA AERPADVAAA AQRHSEDLLV AIAREHVART GCANLCLAGG
VFGNVKLNQR LREIPGVRDV YVLPCMGDGG LALAAAVAVA YREQGTRFPA PSMALGPDAR
SAAQNAELIA SQYPRLAYSR PANLIETLVE ALRENQVLGM FKGRMEFGPR ALCNRSIVYH
AGDTTANDWL NERMERTEFM PFAPVTAVEH AEACYVGWRE DQVAADYMTM TYDCHADFRE
RCPAVVHVDG TARPQIIRPQ ADPFMHALLH AWHARSGQPA LINTSFNRHE EPIVCAPQDA
LGALEDGMVD LVVLGESLLV WRKGENAFAR ARFE
|
|---|
| |