| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3203 |
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| Symbol | |
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| ID | 5354133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 3312242 |
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| End bp | 3314014 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640812254 |
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| Product | thiamine pyrophosphate protein |
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| Protein accession | YP_001348563 |
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| Protein GI | 152989202 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAGCA CGGTTGCCGA TCAACTGCTC GAACGCTTGA GCCAGTGGGG GGTGAAGCGC
GTCTTCGGCT ACCCCGGCGA TGGCATCAAC GGGATCATGG GTGCCATGGG CCGGCGCGCC
GAAGCGTTCG ACTACATCCG CGTGCGGCAC GAGGAGATGG CGGCCTTCAT GGCCGGTGCC
CACGCCAAGT TCACCGGCGA GGTCGGGGTC TGCCTGGCCA CCTCGGGGCC GGGCGCCATC
CACCTGCTCA ACGGGCTCTA CGACGCGCGC ATGGACCACC AGCCGGTACT GGCCATCGTC
GGCCAGCAGG CGGCGACCGC GCTGGGCAGC GACTACCAGC AGGAAGTCGA CCTGCAGAGC
CTGTTCAAGG ACGTTTCCGC CTACGTCGAG ACCGTGGTCA GCCCGGCGCA ACTGCTGCAT
GTGCTGGACC GCGCGCTGCG CGTGGCGGTC GGCGAGCGGC AGGTGGCGAC GGTGATCGTG
CCCAACGACG TGCAACAGAT GGCGGCCCCG GAAAGCCAGC CCCACGAGCA TGGCCACGTG
ATGTCCGCGG TGGGTTTCGT CCAGCCGCGA CCCTACGCGC GCGATGCGGA CCTGCAAGCC
GCCGCGGCGA TCCTCAATCG CGGCCGGCGC GTGGCGATCC TCGCCGGCGC CGGTGCGCTG
GGCGCGCACC GGCAGCTGGA AGCGGTCGCC GAGCGCCTGG CCGCCGGGGT GGCCAAGGCG
CTCCTGGGCA AGGCGGCGGT TTCCGACGAC CTGCCTTACG TGACCGGCTC CATCGGTCTG
CTCGGCACCC GCGCCAGCAG CATGCTGATG GAGCATTGCG ACACCCTGCT GATCGTCGGC
AGCACCTTCC CCTACAGCGA GTTCCTACCC AAGGCCGGTC AGGCGCGGGC GGTGCAGATC
GACCTGTATC CGCGCAACAT CGGCATCCGC TATCCGATCG AGCAGGCCTT GCTCGGCGAT
GCCGGGGAAA CCCTGGAGCG CCTGCTGCCG CTGCTCGAGC AGAAGAAGCA CGGCGCCTGG
CGCCGACGGG TCGAGCGAGC GGTGGCGGCC AGCCGCGAGG AGGCCCAGCG CCAGGCCGAG
GAACCGGCCG ATCCGATCAA CCCGCAACGG GTGTTCCGTA GCTTGTCGGA GCAGTTGCCG
GACGATGCGA TCCTCTGCGG CGACAGCGGC TCGCACACCA ACTGGTACGC CCGCGACGTG
CGCATGCGTC CGGGCATGCT CGGCTCGCTG TCGGGCAAGC TGGCGACCAT GGGCAGCGGC
GTGCCCTACG CCATCGCCGC CAAGCTCGCC TATCCGCAGC GGCCGGTGGT GGCGATGGTC
GGCGACGGGG CGATGCAGAT GAACGGCAAC GCCGAACTGG TCACCGTGCA GCAGTACTGG
CAACGCTGGG CCTCGCCGAC TTTCATCGTA CTGGTGCTGA ACAACGGCGA CCTCAACCAG
GTGACCTGGG AACAGCGCGC GCTGGCCGGC GATCCGGAGT TCAGCCCGGC GCAGGAAGTG
ATCGACTTCC CCTACGCGCG CTATGCCGAC ATGCTCGGCT TCAAGGGTAT CCGCGTGGAT
CGCCCGGAGG ACATCGACGC CGCCTGGGCC GAGGCCTTCG CCGCCGACCG CCCGGTGCTG
CTGGAGGTGC TCACCGACCC GAACGTGCCG CCGCTGCCGC CGCACATCAG TTTCGAGCAG
GCCAAGCACC TGCTTGGCGC CATGCTGCAG GACGATCCCA AGCGCTGGGG CGTGATCCGC
CAGAGCGCCC GGCAGGTTCT CGCCCGGCAC TGA
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| Protein sequence | MSSTVADQLL ERLSQWGVKR VFGYPGDGIN GIMGAMGRRA EAFDYIRVRH EEMAAFMAGA
HAKFTGEVGV CLATSGPGAI HLLNGLYDAR MDHQPVLAIV GQQAATALGS DYQQEVDLQS
LFKDVSAYVE TVVSPAQLLH VLDRALRVAV GERQVATVIV PNDVQQMAAP ESQPHEHGHV
MSAVGFVQPR PYARDADLQA AAAILNRGRR VAILAGAGAL GAHRQLEAVA ERLAAGVAKA
LLGKAAVSDD LPYVTGSIGL LGTRASSMLM EHCDTLLIVG STFPYSEFLP KAGQARAVQI
DLYPRNIGIR YPIEQALLGD AGETLERLLP LLEQKKHGAW RRRVERAVAA SREEAQRQAE
EPADPINPQR VFRSLSEQLP DDAILCGDSG SHTNWYARDV RMRPGMLGSL SGKLATMGSG
VPYAIAAKLA YPQRPVVAMV GDGAMQMNGN AELVTVQQYW QRWASPTFIV LVLNNGDLNQ
VTWEQRALAG DPEFSPAQEV IDFPYARYAD MLGFKGIRVD RPEDIDAAWA EAFAADRPVL
LEVLTDPNVP PLPPHISFEQ AKHLLGAMLQ DDPKRWGVIR QSARQVLARH
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