| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3153 |
|---|
| Symbol | glgB |
|---|
| ID | 5359712 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 3265992 |
|---|
| End bp | 3268190 |
|---|
| Gene Length | 2199 bp |
|---|
| Protein Length | 732 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640812204 |
|---|
| Product | glycogen branching enzyme |
|---|
| Protein accession | YP_001348513 |
|---|
| Protein GI | 152986172 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
|---|
| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.252202 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAC CGATGTCCGA ACGCGAACGC TGGCAATTGG AACTGGACAA GCTGCAACGC
GGCCTGCAGG GCGATCCCTT CGCCTTCCTC GGCCCGCAAC GCGACGCCGA CGGCGAAGGC
GGCGTGCTGC GCGCCTACCT GCCCGGCGCG CAGCGCGTCG AACTGCTCGA CGAAGACGGC
GCGACGCTCG CCGAGCTGGA GCAGAGCGAC CCGGGCAGCG GCCTGTTCCA GCACCACCTG
GAGCGCCTGC CGGCGCGCTA CCGCCTGCGC ACGCACTGGC CGGACGGCGT GCAGGAAAGC
GAGGACCCCT ATGCCTTCGG GCCGTTGCTC GGCGAACTCG ACCTGTACCT GTTCGCCGAA
GGCAACCACC GCCAGCTGGC TTCCTGCCTG GGCGCACAAC TGACCCGTCA CGAAGGCGTG
GACGGCGTGC GCTTCGCGGT ATGGGCGCCG AACGCCGTGC GCGTCTCGGT GGTCGGCGAT
TTCAATGGTT GGGATGGGCG CCGCCATCCG ATGCGGCGGC GCTATCCCTC CGGCGTCTGG
GAACTGTTCA TCCCGCGTCT CGGCGCGGGC GAACTGTACA AATACGAGTT GCAGGGCCAC
GCCGGCCTCC TGCCGCTGAA GGCCGACCCG TTGGCACTGG CCTGCGAGAC GCCGCCCGGG
ACCGCCTCGA AGACCTGCGC GGCGCTGCGC CACGAATGGC GCGACCAGGA CTGGCTGGCG
CGGCGCGCGG AGCGCCAGGG CTACGCGGCG CCGCTGTCGA TCTACGAGGT TCACGCCGGT
TCCTGGCGCC ATCGCGACGG CCGGCCGCCG CGCTGGTCGG AGCTGGCGGA GGAACTGATT
CCCTACGTGC GCCAGCTCGG CTTCAGCCAT ATCGAACTGA TGCCGGTGAT GGAGCACCCC
TTCGGCGGTT CCTGGGGCTA CCAGCCGCTC GGGCTGTTCG CGCCGACCGC GCGCTACGGC
ACGCCGGAGG ACTTCGCCGG GTTCGTCGAC GCCTGCCACC AGGCTGGGAT CGGCGTGATC
CTCGACTGGG TACCGGCGCA TTTCCCCACC GACGCCCATG GCCTGGGCCG TTTCGACGGC
ACGGCGCTGT ACGAGTACGA ACATCCCTTC GAAGGCTTCC ACCAGGACTG GGATACCTAC
ATCTACAACC TCGGCCGCAG CGAGGTGCAC GGCTTCATGC TGGCCTCGGC GCTGCACTGG
CTGCGCACCT ACCACGTCGA CGGACTGCGG GTGGATGCCG TGGCCTCGAT GCTCTACCGC
GACTATTCGC GCAAGGAAGG CGAATGGCTG CCGAACCGCC ATGGCGGCCG GGAGAACCTG
GAGGCCATCG ATTTCCTCCA TCATCTCAAC CAGGTGGTCG CCAGCGAGAC CCCCGGGGCG
CTGGTGATCG CCGAGGAATC CACCGCCTGG CCCGGCGTCA GCCGTCCGGT GGCGGAGGGC
GGCCTCGGCT TCAGCCACAA GTGGAACATG GGCTGGATGC ACGACAGCCT GGCGTACATC
GGCGAAGACC CGCTGCACCG GCGCTATCAC CACCACCAGT TGACCTTCGG CCTGCTCTAC
GCCTTCTCCG AGCATTTCAT CCTGCCGATC TCCCACGACG AGGTGGTGCA CGGCAAGCAT
TCGCTACTGG ACAAGATGCC CGGCGACCGC TGGCAGAAGT TCGCCAACCT GCGCCTGTAC
CTGAGCTTCA TGTGGTCGCA CCCGGGCAAG AAGCTGTTGT TCATGGGCTG CGAGTTCGGC
CAGTGGCGCG AGTGGAACCA TGACGGCGAG CTGGACTGGT ACCTGTTGCG CTATCCGGAA
CACCAGGGCG TACAGGACCT GGTGGCGACG CTCAACCGCC TCTACCACGA GCTTCCCGCG
CTGCATGCGC GCGACGGCGA GGCCCTCGGC TTCGAATGGC TGATCGGCGA CGACCAGGCC
AACAGTGTTT ACGCCTGGCT GCGCCACGCG GCCGGCGAGC CCTCGCTGCT GGCGGTGCAC
AACTTCACCC CGGTACCGCG CCAGGGCTAT CGGATCGGCG TACCGCAAGG CGGCGACTGG
GACGTGCTGC TCAACAGCGA CGCGCAGGCA TACGCCGGTT CCGGCGCCGG CAGCCAGGGC
CGGGTCGCCA GCGAACCGGC CGGGGCCCAT GGCCAGGCGC AGTCGCTGCT GCTCGAACTG
CCGCCGCTGG GCACGTTGCT GCTGCGTCCG GCCGGCTGA
|
|---|
| Protein sequence | MSEPMSERER WQLELDKLQR GLQGDPFAFL GPQRDADGEG GVLRAYLPGA QRVELLDEDG
ATLAELEQSD PGSGLFQHHL ERLPARYRLR THWPDGVQES EDPYAFGPLL GELDLYLFAE
GNHRQLASCL GAQLTRHEGV DGVRFAVWAP NAVRVSVVGD FNGWDGRRHP MRRRYPSGVW
ELFIPRLGAG ELYKYELQGH AGLLPLKADP LALACETPPG TASKTCAALR HEWRDQDWLA
RRAERQGYAA PLSIYEVHAG SWRHRDGRPP RWSELAEELI PYVRQLGFSH IELMPVMEHP
FGGSWGYQPL GLFAPTARYG TPEDFAGFVD ACHQAGIGVI LDWVPAHFPT DAHGLGRFDG
TALYEYEHPF EGFHQDWDTY IYNLGRSEVH GFMLASALHW LRTYHVDGLR VDAVASMLYR
DYSRKEGEWL PNRHGGRENL EAIDFLHHLN QVVASETPGA LVIAEESTAW PGVSRPVAEG
GLGFSHKWNM GWMHDSLAYI GEDPLHRRYH HHQLTFGLLY AFSEHFILPI SHDEVVHGKH
SLLDKMPGDR WQKFANLRLY LSFMWSHPGK KLLFMGCEFG QWREWNHDGE LDWYLLRYPE
HQGVQDLVAT LNRLYHELPA LHARDGEALG FEWLIGDDQA NSVYAWLRHA AGEPSLLAVH
NFTPVPRQGY RIGVPQGGDW DVLLNSDAQA YAGSGAGSQG RVASEPAGAH GQAQSLLLEL
PPLGTLLLRP AG
|
|---|
| |