Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3146 |
Symbol | glgX |
ID | 5354218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 3258140 |
End bp | 3260290 |
Gene Length | 2151 bp |
Protein Length | 716 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640812197 |
Product | glycogen debranching enzyme GlgX |
Protein accession | YP_001348506 |
Protein GI | 152984843 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.371141 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAGAA AGCGTAGCCA CGCCCCTTCG CGGATCAGCG AAGGACGCCC CTTTCCCCTC GGCGCCACCT GGGACGGCCT GGGGGTCAAT TTCGCGCTGT TCTCGGCCCA CGCGACCAGG GTCGAGCTGT GCCTGTTCGA CGCGCGCGGG GAAAAGGAGA TCGAGCGCAT CGAATTGCCC GAGTACACCG ACGAGATCTG GCATGGCTAC CTGCCAGATG CCCATCCGGG GCAGATCTAC GGCTACCGGG TGCATGGCCC CTACGAGCCG GACGCCGGCC ACCGCTTCAA TCCCAACAAG CTGCTGCTCG ACCCCTACGC CAAGCAGCTG GTCGGCCGCC TGCGCTGGTC CGAGGCGCTG TTCGGCTACA CCATCGGCGC GGCGGACGCC GACCTCAGCT TCGACGAGCG CGACAGCGCG CCCTTCGTGC CCAAGTCGAA GGTCATCGAT CCCGCCTTCA CCTGGGCCGA GCGCCCGCCG GTACGCGTGC CCTGGGACCG CACGGTGATC TACGAGGCGC ACCTGCGCGG GCTCAGCATG CGCCACCCGC AGGTGCCGGA GGCGGTGCGC GGCACCTTGG CCGGGCTGAT GAACGCCGAG TTGCTGGCGC ATATCCGCCG GCTCGGGGTG ACCAGCGTCG AACTACTGCC GATCCATGGC TTCGTCGACG ACAAGCACCT GCTGGAAAAC GGCATGAGCA ACTACTGGGG CTACAACAGC ATCGCCTTCT TCGCCCCGCA CCCGGCCTAC CTCGCCAGCG GCCAGGTCAA CGAGTTCAAG GAGATGGTCG CGCACCTCCA CGACGCCGGC CTGGAGCTGA TCCTCGACGT GGTCTACAAC CATACCGCCG AAGGCAACGA GCTGGGCCCG ACCCTGTGCA TGCGCGGCAT CGACAACGCC TCGTACTACC GCCTGATGCC CGAGCAGCGG CGCTACTACA TCAACGACTC CGGCACCGGC AACACCCTCG ACCTCAGCCA TCCCTGCGTG CTGCAGATGG TCACCGACTC GCTGCGCTAC TGGGCCACGG AGATGCGCGT GGACGGCTTC CGTTTCGACC TGGCGACCAT CCTCGGCCGT CATCCGGACG GCTTCGACGA GCGCCACGGC TTTCTCGTCG CCTGCCGCCA GGACCCGGTG CTGAGCCAGT GCAAGCTGAT CGCCGAACCC TGGGACTGCG GCCCGGGCGG CTACCAGGTC GGCGGCTTCC CGCCCGGCTG GGCGGAATGG AACGACCGCT TCCGCGACTG CGTGCGCGCC TACTGGCGCG GCGACGACGG CATGCTGCCG GAACTGGCGC GACGCCTGAC CGCCTCCGGC GATCTCTACG ACCAGCGCGG ACGGCGGCCC TACGCCTCGG TCAACTTCGT CACCGCCCAC GACGGCTTCA CCCTGCGCGA CGTGGTTTCC TACGACCACA AGCACAACGA GGCCAACGGC GAGAACAACG CCGACGGCAG CGACCACAAC CTGTCCTGGA ACCACGGCTG CGAGGGCCCC ACCGACGACC CGGAGATCCG CGCTCTGCGC CTGCGCCAGA TGCGCAACCT GCTGTCTACC CTGCTGCTGT CCCAGGGCAC TCCGATGCTG GTCGCCGGCG ACGAGTTCAG CCGCACCCAG CAGGGCAACA ACAATGTCTA TTGCCAGGAC AACGAACTGG GCTGGATCGA CTGGCGGCTG GACGACGAGG GCCGTTCGCT GCTGGCCTTC ACCCAGCGCC TGCTGGCCCT GCGCCAACGC TATCCGATCC TGCGCAGGGG GCGGTTCCTG GTCGGCGAGT ACAACCAGGC GCTGGGGGTC AAGGACGTCA CCTGGCTGGC TCCAGGGGGC GAGGAAATGA CCGAGGAGCA CTGGCACGAC GAGCACGCCC GCTGTCTCGG CGTGCTCCTC GATGGCCGCG CGCAGCCCAC CGGCATCCTG CGCAGCGGCG AGGACGCCAC CCTGCTGCTG ATCCTCAACG CCTACCACGA TGCGGTGTCC TTCCGCCTTC CCGAGGTGGC CGAAGGCAGC GGCTGGAACT GCCTGCTGGA TACCCAGCGC CCCGAGGAAC CCCTCGGCGA GGGCTATGCC TTCGCCAGCG AGTTCCTGGT CGGCGGCCGC AGCTTCCTGC TCTTCGAGCT GCAGCCGCCG GGAACGGGAG CGCAAGGATG A
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Protein sequence | MSRKRSHAPS RISEGRPFPL GATWDGLGVN FALFSAHATR VELCLFDARG EKEIERIELP EYTDEIWHGY LPDAHPGQIY GYRVHGPYEP DAGHRFNPNK LLLDPYAKQL VGRLRWSEAL FGYTIGAADA DLSFDERDSA PFVPKSKVID PAFTWAERPP VRVPWDRTVI YEAHLRGLSM RHPQVPEAVR GTLAGLMNAE LLAHIRRLGV TSVELLPIHG FVDDKHLLEN GMSNYWGYNS IAFFAPHPAY LASGQVNEFK EMVAHLHDAG LELILDVVYN HTAEGNELGP TLCMRGIDNA SYYRLMPEQR RYYINDSGTG NTLDLSHPCV LQMVTDSLRY WATEMRVDGF RFDLATILGR HPDGFDERHG FLVACRQDPV LSQCKLIAEP WDCGPGGYQV GGFPPGWAEW NDRFRDCVRA YWRGDDGMLP ELARRLTASG DLYDQRGRRP YASVNFVTAH DGFTLRDVVS YDHKHNEANG ENNADGSDHN LSWNHGCEGP TDDPEIRALR LRQMRNLLST LLLSQGTPML VAGDEFSRTQ QGNNNVYCQD NELGWIDWRL DDEGRSLLAF TQRLLALRQR YPILRRGRFL VGEYNQALGV KDVTWLAPGG EEMTEEHWHD EHARCLGVLL DGRAQPTGIL RSGEDATLLL ILNAYHDAVS FRLPEVAEGS GWNCLLDTQR PEEPLGEGYA FASEFLVGGR SFLLFELQPP GTGAQG
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