Gene PSPA7_3146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_3146 
SymbolglgX 
ID5354218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp3258140 
End bp3260290 
Gene Length2151 bp 
Protein Length716 aa 
Translation table11 
GC content68% 
IMG OID640812197 
Productglycogen debranching enzyme GlgX 
Protein accessionYP_001348506 
Protein GI152984843 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases 
TIGRFAM ID[TIGR02100] glycogen debranching enzyme GlgX 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.371141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGAA AGCGTAGCCA CGCCCCTTCG CGGATCAGCG AAGGACGCCC CTTTCCCCTC 
GGCGCCACCT GGGACGGCCT GGGGGTCAAT TTCGCGCTGT TCTCGGCCCA CGCGACCAGG
GTCGAGCTGT GCCTGTTCGA CGCGCGCGGG GAAAAGGAGA TCGAGCGCAT CGAATTGCCC
GAGTACACCG ACGAGATCTG GCATGGCTAC CTGCCAGATG CCCATCCGGG GCAGATCTAC
GGCTACCGGG TGCATGGCCC CTACGAGCCG GACGCCGGCC ACCGCTTCAA TCCCAACAAG
CTGCTGCTCG ACCCCTACGC CAAGCAGCTG GTCGGCCGCC TGCGCTGGTC CGAGGCGCTG
TTCGGCTACA CCATCGGCGC GGCGGACGCC GACCTCAGCT TCGACGAGCG CGACAGCGCG
CCCTTCGTGC CCAAGTCGAA GGTCATCGAT CCCGCCTTCA CCTGGGCCGA GCGCCCGCCG
GTACGCGTGC CCTGGGACCG CACGGTGATC TACGAGGCGC ACCTGCGCGG GCTCAGCATG
CGCCACCCGC AGGTGCCGGA GGCGGTGCGC GGCACCTTGG CCGGGCTGAT GAACGCCGAG
TTGCTGGCGC ATATCCGCCG GCTCGGGGTG ACCAGCGTCG AACTACTGCC GATCCATGGC
TTCGTCGACG ACAAGCACCT GCTGGAAAAC GGCATGAGCA ACTACTGGGG CTACAACAGC
ATCGCCTTCT TCGCCCCGCA CCCGGCCTAC CTCGCCAGCG GCCAGGTCAA CGAGTTCAAG
GAGATGGTCG CGCACCTCCA CGACGCCGGC CTGGAGCTGA TCCTCGACGT GGTCTACAAC
CATACCGCCG AAGGCAACGA GCTGGGCCCG ACCCTGTGCA TGCGCGGCAT CGACAACGCC
TCGTACTACC GCCTGATGCC CGAGCAGCGG CGCTACTACA TCAACGACTC CGGCACCGGC
AACACCCTCG ACCTCAGCCA TCCCTGCGTG CTGCAGATGG TCACCGACTC GCTGCGCTAC
TGGGCCACGG AGATGCGCGT GGACGGCTTC CGTTTCGACC TGGCGACCAT CCTCGGCCGT
CATCCGGACG GCTTCGACGA GCGCCACGGC TTTCTCGTCG CCTGCCGCCA GGACCCGGTG
CTGAGCCAGT GCAAGCTGAT CGCCGAACCC TGGGACTGCG GCCCGGGCGG CTACCAGGTC
GGCGGCTTCC CGCCCGGCTG GGCGGAATGG AACGACCGCT TCCGCGACTG CGTGCGCGCC
TACTGGCGCG GCGACGACGG CATGCTGCCG GAACTGGCGC GACGCCTGAC CGCCTCCGGC
GATCTCTACG ACCAGCGCGG ACGGCGGCCC TACGCCTCGG TCAACTTCGT CACCGCCCAC
GACGGCTTCA CCCTGCGCGA CGTGGTTTCC TACGACCACA AGCACAACGA GGCCAACGGC
GAGAACAACG CCGACGGCAG CGACCACAAC CTGTCCTGGA ACCACGGCTG CGAGGGCCCC
ACCGACGACC CGGAGATCCG CGCTCTGCGC CTGCGCCAGA TGCGCAACCT GCTGTCTACC
CTGCTGCTGT CCCAGGGCAC TCCGATGCTG GTCGCCGGCG ACGAGTTCAG CCGCACCCAG
CAGGGCAACA ACAATGTCTA TTGCCAGGAC AACGAACTGG GCTGGATCGA CTGGCGGCTG
GACGACGAGG GCCGTTCGCT GCTGGCCTTC ACCCAGCGCC TGCTGGCCCT GCGCCAACGC
TATCCGATCC TGCGCAGGGG GCGGTTCCTG GTCGGCGAGT ACAACCAGGC GCTGGGGGTC
AAGGACGTCA CCTGGCTGGC TCCAGGGGGC GAGGAAATGA CCGAGGAGCA CTGGCACGAC
GAGCACGCCC GCTGTCTCGG CGTGCTCCTC GATGGCCGCG CGCAGCCCAC CGGCATCCTG
CGCAGCGGCG AGGACGCCAC CCTGCTGCTG ATCCTCAACG CCTACCACGA TGCGGTGTCC
TTCCGCCTTC CCGAGGTGGC CGAAGGCAGC GGCTGGAACT GCCTGCTGGA TACCCAGCGC
CCCGAGGAAC CCCTCGGCGA GGGCTATGCC TTCGCCAGCG AGTTCCTGGT CGGCGGCCGC
AGCTTCCTGC TCTTCGAGCT GCAGCCGCCG GGAACGGGAG CGCAAGGATG A
 
Protein sequence
MSRKRSHAPS RISEGRPFPL GATWDGLGVN FALFSAHATR VELCLFDARG EKEIERIELP 
EYTDEIWHGY LPDAHPGQIY GYRVHGPYEP DAGHRFNPNK LLLDPYAKQL VGRLRWSEAL
FGYTIGAADA DLSFDERDSA PFVPKSKVID PAFTWAERPP VRVPWDRTVI YEAHLRGLSM
RHPQVPEAVR GTLAGLMNAE LLAHIRRLGV TSVELLPIHG FVDDKHLLEN GMSNYWGYNS
IAFFAPHPAY LASGQVNEFK EMVAHLHDAG LELILDVVYN HTAEGNELGP TLCMRGIDNA
SYYRLMPEQR RYYINDSGTG NTLDLSHPCV LQMVTDSLRY WATEMRVDGF RFDLATILGR
HPDGFDERHG FLVACRQDPV LSQCKLIAEP WDCGPGGYQV GGFPPGWAEW NDRFRDCVRA
YWRGDDGMLP ELARRLTASG DLYDQRGRRP YASVNFVTAH DGFTLRDVVS YDHKHNEANG
ENNADGSDHN LSWNHGCEGP TDDPEIRALR LRQMRNLLST LLLSQGTPML VAGDEFSRTQ
QGNNNVYCQD NELGWIDWRL DDEGRSLLAF TQRLLALRQR YPILRRGRFL VGEYNQALGV
KDVTWLAPGG EEMTEEHWHD EHARCLGVLL DGRAQPTGIL RSGEDATLLL ILNAYHDAVS
FRLPEVAEGS GWNCLLDTQR PEEPLGEGYA FASEFLVGGR SFLLFELQPP GTGAQG