Gene PSPA7_3117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_3117 
SymbolcydB1 
ID5356372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp3232627 
End bp3233631 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content66% 
IMG OID640812168 
Productcytochrome d ubiquinol oxidase, subunit II 
Protein accessionYP_001348477 
Protein GI152984718 
COG category[C] Energy production and conversion 
COG ID[COG1294] Cytochrome bd-type quinol oxidase, subunit 2 
TIGRFAM ID[TIGR00203] cytochrome d oxidase, subunit II (cydB) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCATCG ACCTACCCCT GATCTGGGTG ATCATCATTC TGTTCAGCGT CATGATGTAC 
GTGGTGATGG ATGGCTTCGA CCTGGGCATC GGCATGCTCT ACCCGTTCTT TCGTGACGCG
CGCGACCGCG ACGTGATGAT GAACAGCGTG GCGCCGGTCT GGGACGGCAA CGAGACCTGG
CTGGTGCTGG GCGGGGCCGG CCTGTTCGGA GCCTTTCCGC TGGCCTACTC GGTGGTCCTG
CCGGCGCTCT ACCTGCCGCT GGTGTTCATG CTGATCGGCC TGGTGTTCCG TGGCGTGGCC
TTCGAGTTCC GCTTCAAGGC CAGGCCGGCC AGGCGGCATG TCTGGGACAA GGCGTTCATC
GGCGGTTCGT TGCTGGCGAC CTTCTGCCAG GGCGTGGTCC TGGGAGCCTT CATCGATGGC
ATCCCGGTGG AGAATCGCCG CTTCGCCGGC GGCTCGCTGG ACTGGATCGC ACCCTTTCCG
CTGTTCTGCG GCGTGGGGCT GGTGGTGGCT TACAGCCTGC TCGGCTGCAC CTGGCTGATC
ATGAAGACCG AAGGCCGCCT GCAGGAGCGC ATGCACGACC TGGCGCGACC GCTGGCGCTT
GCGCTGCTGG CGGTGATCGG CATCGTCAGT CTGTGGACAC CCTTGAGCCA TCCGCAGATC
GCCGCGCGCT GGTTCAGCCT GCCGAACCTG CTCTGGCTGC TACCGGTGCC GCTCCTCGTG
CTGCTGACGT TCCGCCAGTT GTTGCGGGCG GTGGCGGCGG ACGCCCAGGC CCGGCCCTTC
ATCCTCACCC TGGTGCTGAT CTTCCTCGGC TACAGCGGCC TGGGCATCAG CCTGTGGCCG
AACATCGTGC CGCCGGCGCT GGACTTCCGC GCCGCCGCCT CGCCGCCACA GAGCCAGAGC
TTCATGCTGG TCGGCGCGCT GTTCATCATT CCCTTCATCC TCGGCTACAC CGCCTGGAGC
TACTACGTGT TTCGCGGCAA GAGCGCCGAT GCCGGCTACC ACTGA
 
Protein sequence
MGIDLPLIWV IIILFSVMMY VVMDGFDLGI GMLYPFFRDA RDRDVMMNSV APVWDGNETW 
LVLGGAGLFG AFPLAYSVVL PALYLPLVFM LIGLVFRGVA FEFRFKARPA RRHVWDKAFI
GGSLLATFCQ GVVLGAFIDG IPVENRRFAG GSLDWIAPFP LFCGVGLVVA YSLLGCTWLI
MKTEGRLQER MHDLARPLAL ALLAVIGIVS LWTPLSHPQI AARWFSLPNL LWLLPVPLLV
LLTFRQLLRA VAADAQARPF ILTLVLIFLG YSGLGISLWP NIVPPALDFR AAASPPQSQS
FMLVGALFII PFILGYTAWS YYVFRGKSAD AGYH