| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3117 |
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| Symbol | cydB1 |
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| ID | 5356372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 3232627 |
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| End bp | 3233631 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640812168 |
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| Product | cytochrome d ubiquinol oxidase, subunit II |
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| Protein accession | YP_001348477 |
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| Protein GI | 152984718 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCATCG ACCTACCCCT GATCTGGGTG ATCATCATTC TGTTCAGCGT CATGATGTAC
GTGGTGATGG ATGGCTTCGA CCTGGGCATC GGCATGCTCT ACCCGTTCTT TCGTGACGCG
CGCGACCGCG ACGTGATGAT GAACAGCGTG GCGCCGGTCT GGGACGGCAA CGAGACCTGG
CTGGTGCTGG GCGGGGCCGG CCTGTTCGGA GCCTTTCCGC TGGCCTACTC GGTGGTCCTG
CCGGCGCTCT ACCTGCCGCT GGTGTTCATG CTGATCGGCC TGGTGTTCCG TGGCGTGGCC
TTCGAGTTCC GCTTCAAGGC CAGGCCGGCC AGGCGGCATG TCTGGGACAA GGCGTTCATC
GGCGGTTCGT TGCTGGCGAC CTTCTGCCAG GGCGTGGTCC TGGGAGCCTT CATCGATGGC
ATCCCGGTGG AGAATCGCCG CTTCGCCGGC GGCTCGCTGG ACTGGATCGC ACCCTTTCCG
CTGTTCTGCG GCGTGGGGCT GGTGGTGGCT TACAGCCTGC TCGGCTGCAC CTGGCTGATC
ATGAAGACCG AAGGCCGCCT GCAGGAGCGC ATGCACGACC TGGCGCGACC GCTGGCGCTT
GCGCTGCTGG CGGTGATCGG CATCGTCAGT CTGTGGACAC CCTTGAGCCA TCCGCAGATC
GCCGCGCGCT GGTTCAGCCT GCCGAACCTG CTCTGGCTGC TACCGGTGCC GCTCCTCGTG
CTGCTGACGT TCCGCCAGTT GTTGCGGGCG GTGGCGGCGG ACGCCCAGGC CCGGCCCTTC
ATCCTCACCC TGGTGCTGAT CTTCCTCGGC TACAGCGGCC TGGGCATCAG CCTGTGGCCG
AACATCGTGC CGCCGGCGCT GGACTTCCGC GCCGCCGCCT CGCCGCCACA GAGCCAGAGC
TTCATGCTGG TCGGCGCGCT GTTCATCATT CCCTTCATCC TCGGCTACAC CGCCTGGAGC
TACTACGTGT TTCGCGGCAA GAGCGCCGAT GCCGGCTACC ACTGA
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| Protein sequence | MGIDLPLIWV IIILFSVMMY VVMDGFDLGI GMLYPFFRDA RDRDVMMNSV APVWDGNETW
LVLGGAGLFG AFPLAYSVVL PALYLPLVFM LIGLVFRGVA FEFRFKARPA RRHVWDKAFI
GGSLLATFCQ GVVLGAFIDG IPVENRRFAG GSLDWIAPFP LFCGVGLVVA YSLLGCTWLI
MKTEGRLQER MHDLARPLAL ALLAVIGIVS LWTPLSHPQI AARWFSLPNL LWLLPVPLLV
LLTFRQLLRA VAADAQARPF ILTLVLIFLG YSGLGISLWP NIVPPALDFR AAASPPQSQS
FMLVGALFII PFILGYTAWS YYVFRGKSAD AGYH
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