Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3098 |
Symbol | |
ID | 5353665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 3214740 |
End bp | 3215615 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640812149 |
Product | putative dehydrogenase |
Protein accession | YP_001348458 |
Protein GI | 152984196 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.200424 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTCG GTTTTCTCGG GTTGGGCGGC ATGGGCTCGG CGATGGCCAC CCGCCTGGTA CAGGCGGGGC TCGAGGTCAC GGTCTGGAAT CGTTCCGCGG CGGCCTGCGA GCCGCTGCTG GCGCTGGGCG CCGCCAGGGC GGGCGAGGCC GCCGAGCTGT TCGGCCTGGA CGTGGTCATC AGCATGCTGG CGGACGACCA GGCGACCCGC GGGGTACTGC TCGACAGCGG CGTGCTCGAA CGGGCGCGTC CCGGTCTCAT CCATCTGAGC ATGTCGACGC TGTCGATCGA CTGCGTCGAG GCGCTCGCCG CAGAGCACCG GCGCCTGGGG CTGGCGTTCG TCGCCGCGCC GGTGTTCGGG CGCACCGACG TGGCCGCCGC CGGCAGGCTG AACATCGTCG TCGGTGGCCC GGAGGAGGCC ATCGAGCATG TCAAGCCGCT GCTGGAGATT ATGGGACAGA AGACATGGTT TTTCGGAAAA GATCCACTCA GCGCAATGGC GGTGAAGATC TCTGGTAACT TCATGATCGC CAGCGCCATC GAAAGCATGG GCGAGAGCGT CGCCCTGGTG AAACGCCTGG GCGTCGACCC CGGACGCTTC ATGGAACTCA TGTCCTCGAC GCTGTTCGAT GCGCCTGTCT ACCGCAACTA CGGTCCGCAG ATCGTCGAGC AGCGCTTCAC TCCCGCCGGC TTCCGCCTGG TCCTCGGGCT GAAGGACGTC GACCTGGCGC TGTCCGCCGG CAAGAGCCGC AACGTACCGT TGCCGCTGGC CAGCCTGCTG CACGATGTGC TGCTGGAGGC CATCGCCCAT GGCGACGGGG AATCGGACTG GACGGCGCTG GCGAAGGTAG CGTTGTCACG ATCGGGACAA ATCTGA
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Protein sequence | MKVGFLGLGG MGSAMATRLV QAGLEVTVWN RSAAACEPLL ALGAARAGEA AELFGLDVVI SMLADDQATR GVLLDSGVLE RARPGLIHLS MSTLSIDCVE ALAAEHRRLG LAFVAAPVFG RTDVAAAGRL NIVVGGPEEA IEHVKPLLEI MGQKTWFFGK DPLSAMAVKI SGNFMIASAI ESMGESVALV KRLGVDPGRF MELMSSTLFD APVYRNYGPQ IVEQRFTPAG FRLVLGLKDV DLALSAGKSR NVPLPLASLL HDVLLEAIAH GDGESDWTAL AKVALSRSGQ I
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