| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3093 |
|---|
| Symbol | |
|---|
| ID | 5353646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 3207933 |
|---|
| End bp | 3209078 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640812144 |
|---|
| Product | transport protein |
|---|
| Protein accession | YP_001348453 |
|---|
| Protein GI | 152983597 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.935055 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGGC GCCTGATGTA CAGCGTCCTG CTCGGTCACT ACCTGTCGGC GTTCACCGCC
CTCGGCGTGC CCCTGTTCCT GCCGCGGATC CTCGCCGACC TGGCGCCGGG CACGCCGGGC
TGGGCCATCG GCGTGCTGTT CGTCCTGCCG ACCCTGTGCA CCGCGCTGGC GGCCCCGTTC
TGGGGCCGCC TGGCCGACCG CCACGGGTGC CGGCTGTCCC TGCTGCGGGC ACATGCGGGA
CTGGCGCTCG GCTTCCTGCT GGCCGGGCTG AGCCCCAACC TCTGGACGTT CGTCCTCGCC
CTGGTGATCC AGGGCAGCTT CGGTGGCGCC ATGGCTGCCT CCAACGCCTA CCTGGCGACC
CAGCTGGACG ACGGCGAGCT GTCGCGCGCA CTGAACTGGA CCCAGTACTC GGCGCGCCTG
GCGATGATCA GCGGACCGGT CCTGCTCGGC CTGCTGACCG CCAGCGGCAT GGGCCAGGAA
CTCTACCGGG TGCTGGCCTG GCTGCCGTTG CTGGCTTTCG TGCTGATCCT CCCGTTGCCT
GCCGATCATG GCCGCCAGCG GGCCTCCGGG AGTGCCGGGG AAGCCGGTGC GGGCGCTCTG
CCGGGCGACC TGGCGCGGCT GCTCGCCGTG CAGTTCCTGT TCTGTTTCGC GATGGTGCTG
GGCTTCCCCT ACTTCGTTCC CTATGGCGAG GCCCTGGGCC TGCGCAACGA CGCTCTCATC
GGCCTGTTCT ACGCGCTGCC GCACCTGGTC TACCTGGTGG CCCTGCCGCG CCTGCAGCGC
TACCCCGCCA ACCTGTTGCT GCCGGGGCTG GGGCTGTTCG CCCTGGGCAA CTTCCTGCAG
TTCGGCGCCG GCCAACCGCT GTCGCTGTTC GCCTGGCGCC TGCTCGCGGG GCTCGGCATG
CTGCTCGCCT TCATCGGCCT GCATCGCTGT CTCAGTCAGC GCCGCCGCCA TGGCAGCGCC
GGACGGCTGT TCGCCTGGTT CGACTCCAGC GGCAAATGGG CCGGCGCTGC CGCGGGTGCC
GCGGCCGGCC TGGCCAGCCA GCACTACGGC ATCGCTTCAC CGTTCCTGGT CGCCGGCCTG
GCCGCTTTCG CGGCGCTGTG GCTGGCGCGT CCCCTGCTCG TCGCTCCTCG GGAGATCACC
GCATGA
|
|---|
| Protein sequence | MSRRLMYSVL LGHYLSAFTA LGVPLFLPRI LADLAPGTPG WAIGVLFVLP TLCTALAAPF
WGRLADRHGC RLSLLRAHAG LALGFLLAGL SPNLWTFVLA LVIQGSFGGA MAASNAYLAT
QLDDGELSRA LNWTQYSARL AMISGPVLLG LLTASGMGQE LYRVLAWLPL LAFVLILPLP
ADHGRQRASG SAGEAGAGAL PGDLARLLAV QFLFCFAMVL GFPYFVPYGE ALGLRNDALI
GLFYALPHLV YLVALPRLQR YPANLLLPGL GLFALGNFLQ FGAGQPLSLF AWRLLAGLGM
LLAFIGLHRC LSQRRRHGSA GRLFAWFDSS GKWAGAAAGA AAGLASQHYG IASPFLVAGL
AAFAALWLAR PLLVAPREIT A
|
|---|
| |