Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3087 |
Symbol | |
ID | 5356078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 3200448 |
End bp | 3201164 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640812138 |
Product | putative amino acid permease |
Protein accession | YP_001348447 |
Protein GI | 152986056 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0192707 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTCGGCG AACTTCTCGC CCCGCAGTAC CTGCGCTGGT TGCTCGACGG CTTCCTGCTG ACCCTCGGCC TTTCCCTGCT CAGTTGCCTG CTCGCCACTC TGGTCGGCGC CCCCCTGGCC ATCGCCCGGC TGTCGCGCCG GCGCCTGCTG TCCTGGCCGG CGCGCGCCTA CCTGGCGCTG TTCCGCAATA CCCCGCTGCT GGTGCAGCTG TTCTTCTGGT ACTTCGGCGT TCCCGCGCTG CTGCCGGAGG AACTGGTGAG CTGGCTGAAC ACGCCGCACG AGACGCCCCT GCTCGACTGG CCGTCCTTCG AGTTCCTCGC CGGCGCCTGG GGATTGACCC TGTACACGTC GGCCTTCGTC GCCGAGGAGT TCCGCGCCGG CATCGCCTCG GTACGCCCCG AGCAGCGCGC CGCCGGCCTC GCCCTGGGGC TGACCCAGCG CCAGGTATGG CGCGTGGTGG TGCTGCCGCA GGCCCTGCGC ACGGCCCTGC CGCCGCTGCT CGGGCAGTAC ATGAATGCGC TGAAGAACTC CTCGCTGGCG ATGGCCATCG GCCTGGCCGA GCTGTCCTAC GCTTCGCGCC AGGTGGAAAC CGAAACCTTC AAGACCTTCC AGGCCTTCGG CATCGCCACC CTCCTCTACA TCGGCGCCAT CGCCCTGATC GAAGCCTTCG GCCAGGCGTT GCAGCAGACC CGCCGCTATC GCCAGGGAGG TGCCTGA
|
Protein sequence | MFGELLAPQY LRWLLDGFLL TLGLSLLSCL LATLVGAPLA IARLSRRRLL SWPARAYLAL FRNTPLLVQL FFWYFGVPAL LPEELVSWLN TPHETPLLDW PSFEFLAGAW GLTLYTSAFV AEEFRAGIAS VRPEQRAAGL ALGLTQRQVW RVVVLPQALR TALPPLLGQY MNALKNSSLA MAIGLAELSY ASRQVETETF KTFQAFGIAT LLYIGAIALI EAFGQALQQT RRYRQGGA
|
| |