| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3070 |
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| Symbol | opdE |
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| ID | 5355902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 3181639 |
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| End bp | 3182847 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640812120 |
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| Product | membrane protein OpdE |
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| Protein accession | YP_001348429 |
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| Protein GI | 152983651 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACCC GCGCACTCGA TACCGCCAAC GAAAACCCTG AACAATCGGG CTCCTGGAGT
GGCGTCCTGG CCATTGCGGT TTGCGCCTTC GCACTGGTCG CGTCGGAGTT CCTGCCGGTC
AGCCTGCTGA CTCCCATCGC CAACGACCTG GGAACTACCG AGGGCATGGC AGGCCAGGGC
ATCGCCATCT CCGGCGCCTT CGCCGTTTTA ACCAGCCTGT TCATTTCATC CGTTGCCGGC
AGCCTGAACC GCAAGACGCT GTTGCTGGGA CTGACGGCGG CAATGGGCAT GTCCGGCGCA
ATCGTCGCGC TCGCGCCAAA CTATTTCGTC TACATGCTGG GCCGGGCGCT GATCGGCATA
GTGATCGGCG GCTTCTGGTC GATGTCGGCA GCCACGGCCA TGCGCCTGGT GCCTGCCAAC
GACGTGCCGC GAGCCCTGGC CCTCGTCAAT GGCGGCAACG CTCTGGCGAC AGTGGTGGCC
GCGCCGCTGG GCGCCTGGCT AGGCACCCTC ATCGGCTGGC GAGGGGCTTT TCTCTGCCTT
GTGCCGGTAG CCCTGGTGGC ACTGGCCTGG CAATGGACCA CCCTGCCCTC CATGCGGGCC
GGCGCGCGTG CTCCCGGCCC GGGCAATGTG TTCACGGTAT TCGCTCTGCT CAAGCGTCCC
GGTGTGATGC TCGGCATGCT CGCCAGCAGC CTGTTCTTCA TGGGCCAGTT TTCCCTGTTC
ACCTATGTGC GACCATTCCT GGAGACGGTC ACCGGCGTAC ATGGCGCGCA TGTTTCGCTG
GTACTGCTGG TGATCGGTGC AGCGGGCTTT ATCGGCACCC TGCTGATCGA CCGGGTTCTG
CAACGGCGCT TCTTCCAGAC ACTGGTCGCC ATCCCGTTGC TGATGGCCCT GATCGCCCTG
GTACTGACGG TCCTTGGCGG CTGGCCCGCC ATCGTTGTCG TCCTGCTCGG ATTGTGGGGA
CTGACCGGTA CCTCGGCCCC CGTCGGTTGG TGGGCCTGGA TCGCCAGGGT GTTCCCAGAG
GACGCCGAAG CCGGTGGCGG CCTGTTCGTC GCCGTGGTGC AACTCTCCAT TGCCCTGGGC
TCCACATTGG GTGGTCTGCT GTTCGATCGC ACTGGCTATC AGGCGACCTT CTTCGCCAGC
GCCGCGTTGC TGCTGATCGC AGCCTTCCTG ACCATCCTCA CCGCACGCTC GAAAGCCCCG
GCCGGCTAG
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| Protein sequence | MTTRALDTAN ENPEQSGSWS GVLAIAVCAF ALVASEFLPV SLLTPIANDL GTTEGMAGQG
IAISGAFAVL TSLFISSVAG SLNRKTLLLG LTAAMGMSGA IVALAPNYFV YMLGRALIGI
VIGGFWSMSA ATAMRLVPAN DVPRALALVN GGNALATVVA APLGAWLGTL IGWRGAFLCL
VPVALVALAW QWTTLPSMRA GARAPGPGNV FTVFALLKRP GVMLGMLASS LFFMGQFSLF
TYVRPFLETV TGVHGAHVSL VLLVIGAAGF IGTLLIDRVL QRRFFQTLVA IPLLMALIAL
VLTVLGGWPA IVVVLLGLWG LTGTSAPVGW WAWIARVFPE DAEAGGGLFV AVVQLSIALG
STLGGLLFDR TGYQATFFAS AALLLIAAFL TILTARSKAP AG
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