| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3029 |
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| Symbol | |
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| ID | 5356336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 3127548 |
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| End bp | 3129131 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640812080 |
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| Product | cytochrome d1 heme subunit |
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| Protein accession | YP_001348389 |
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| Protein GI | 152988435 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.612791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACAACG CCCGTCCCGC CTCGGCCTTC GGCGTCCTGC CGATGGCCCT CTGCGCCGCG
GCCTCGCTCG CCTCCGCCGC GCCGCCCGAC AGCTCGCCCG GCGAAGCCGA GCGCCTGTTC
CAGGACAACT GCACCACCTG CCACGGCGCC GACCGCGGCG GCTTCATCGC TCCGGCACTG
CACAGCGCCG CGCTGAACTC CAGCGAGACG GCGCTACGCT CGATGATCAT GTTCGGCATT
CCCGACACCC TCATGCCGCC CTGGCTGGGC GTGCTCGAGG ACGAGCAGAT CCGCGCCCTG
GCGCACTTCA TCAAGACCAC CCCGCGCGGC AAGCCCGAAT GGACCCTGGA GGACATCCGC
AACTCGGTCG AGGTCCTCGC GGACGAGTCC ACGCTTCCCG ACAAGCCGGT GTACGACGGC
GACGTGCGCG ACCTGATGGC GGTCATGGTC CGCGGCCGGC ACGGCAAGGC GCCGGCCGCA
CGGGTGGTCT TCTACGACGG CAAGAGCAAC CGGCAGGTGG GCGAGATCGC CACCGAATAT
GCGCCGCACA TCCTCGACTA CGATCCGGTC AACCCGCGCT GGGGCTACCT GAAGACCGAC
ACCTCGGAGG TCTACAAGAT CGATCTCTAC TCGCTGAAGG CGGTACGCAA GGTAAAGGCC
GGCCTGAGCG GGCCGTCGAT CGCGGTATCG GCGGACGGCC GCTACCTGCT GTCCGGCTCC
TTCGCCCCGG GAATCGTCAC CCTGCTGGAC GCACGCACCC TGGAGCCGCT CAGCCGTGTC
GAGCTGCGCG GCACCGACTA CGACGGCAAG CCCGTGGAGT CGGCTTCCAG CATGGTCATC
GCCAGCCCGC TGGACAACAC CTTCGCCATC GCCGTCCGGC AGACCGGCCA GGTCTGGATA
CTCGACCCCC GGCAGCCGCA GGCGCCCATC GTCAGCCGCA TCGAAAAGGT CGGGCGCTTC
GTCCACGACG CCTTCCTCGC CCCGGATCGC CGCCACATGT TCCTCGCCGA TTACGTCGGC
AACGCCTTCG CGGTGGTCGA CCTGCAGCAA CGCAGGCTGG TCAAGACCCT CGAGGGCGGT
TGCCAGCCCC ACGTCGGCTC CGGCGCGGTC ACGCCGATCG GCGGGCGGAT GCTGGCATTC
GGCACCAATA TCGGCACCTG CGACAAGAAG AGCGTCGTGA CGGTCTGGGA TGCGAAGACC
TTCGAAATGG TCAAGCAGAT CCCGGTTTCA GGCGCCACCG AGTCGCCGGC GGCGCATCCG
GACGCACCCT ACGTGGCCGT CGATATCGTC GACAAGGACC GCCGCGCGCG GCATGTCGAA
CTGATCGACA AGAACACCCT GAGCGTGGTC AGGACCCTGG AGGCCGACGG GCACCTGTAC
TTCCCCGAGT ACACCCGCGA CGGCAAATAC CTCTATGTCA GCGGCGGCTA TACCGGCGAC
CGCCTGCACA TCTACGACAG CCACAGCCTC GAAGAAGTGG CCAGCTATCC GCTGGAGACG
CCGGCCGGGA TCTTCTCCCG TGCCCGCACC GAGTGGGGCA CCGTGGGCCT GCCGCTGGCC
CTGGAAGGGA GCGTGAAGCC ATGA
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| Protein sequence | MYNARPASAF GVLPMALCAA ASLASAAPPD SSPGEAERLF QDNCTTCHGA DRGGFIAPAL
HSAALNSSET ALRSMIMFGI PDTLMPPWLG VLEDEQIRAL AHFIKTTPRG KPEWTLEDIR
NSVEVLADES TLPDKPVYDG DVRDLMAVMV RGRHGKAPAA RVVFYDGKSN RQVGEIATEY
APHILDYDPV NPRWGYLKTD TSEVYKIDLY SLKAVRKVKA GLSGPSIAVS ADGRYLLSGS
FAPGIVTLLD ARTLEPLSRV ELRGTDYDGK PVESASSMVI ASPLDNTFAI AVRQTGQVWI
LDPRQPQAPI VSRIEKVGRF VHDAFLAPDR RHMFLADYVG NAFAVVDLQQ RRLVKTLEGG
CQPHVGSGAV TPIGGRMLAF GTNIGTCDKK SVVTVWDAKT FEMVKQIPVS GATESPAAHP
DAPYVAVDIV DKDRRARHVE LIDKNTLSVV RTLEADGHLY FPEYTRDGKY LYVSGGYTGD
RLHIYDSHSL EEVASYPLET PAGIFSRART EWGTVGLPLA LEGSVKP
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