| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2986 |
|---|
| Symbol | pvcB |
|---|
| ID | 5357337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 3075878 |
|---|
| End bp | 3076753 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640812037 |
|---|
| Product | pyoverdine biosynthesis protein PvcB |
|---|
| Protein accession | YP_001348346 |
|---|
| Protein GI | 152987048 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCT ATGTCAGCGA TCAACCGGTA CGTCTCTCGC CGCTGCGCGA CGAACAGGGC
AAGCAGCCGC GCTTCGGCCT GCTGCTGGAG CCGGGCCGTC CCGGCATGCA CGTCGGCGAG
CTGCCGGCAC AGTGGCTCAA GGGCCTGGCG CGCAGCCACC ACCTGCTGCT CCTGCGCGGC
TTCGCCGCCT TCGCCGACGC CGAGAGCCTG ACCCGCTACT GCCACGACTT CGGCGAAGTC
ATGCGGTGGC CGTTCGGCGC GGTGCTCGAG CTGGTGGAGC AGGAAGGCGC CGAGGACCAC
ATCTTCGCCA ACAACTACGT GCCGCTGCAC TGGGATGGCA TGTATCTGGA GACGGTGCCG
GAATTCCAGG TGTTCCACTG TGTCGACGCG CCCGGCGACA GCGACGGTGG CCGCACCACC
TTCAGCTCGA CCCCGGCGGC GCTGCAACTG GCCGACAGTA GCGAGCTGGA ACTCTGGCGC
CGCGCCAGCG GCCGGTACCA GCGCAGCGCG GCGCACTACA GCAGCCGCTC GGCCGCGCCG
ATCATCGAGC GCCACCCGCG CCGCGAGTTT CCCATCCTGC GTTTCTGCGA ACCGCCGGTA
GAGGGCGACG CCAGCTTCAT CAACCCCTCC GAGTTCCACT ACGACGGCAT CGCCCCGGAA
CAGCGCGGCG AACTGCTCGC CAGCCTGCGC CGCTGCCTGT ACCACCCAGA GGCGCACTAC
GCCCACCGCT GGCGCAGCGA CGACCTGGTG ATCGCCGACA ACCTGACCCT GCTGCACGGT
CGCGAGGCCT TCGCCCACCG CGCGCCGCGC CACCTGCGGC GGGTGCATAT CCACGCCGAG
CCGGCGCTGC GCAACCCGCA CCTGCAGCGC GACTGA
|
|---|
| Protein sequence | MNAYVSDQPV RLSPLRDEQG KQPRFGLLLE PGRPGMHVGE LPAQWLKGLA RSHHLLLLRG
FAAFADAESL TRYCHDFGEV MRWPFGAVLE LVEQEGAEDH IFANNYVPLH WDGMYLETVP
EFQVFHCVDA PGDSDGGRTT FSSTPAALQL ADSSELELWR RASGRYQRSA AHYSSRSAAP
IIERHPRREF PILRFCEPPV EGDASFINPS EFHYDGIAPE QRGELLASLR RCLYHPEAHY
AHRWRSDDLV IADNLTLLHG REAFAHRAPR HLRRVHIHAE PALRNPHLQR D
|
|---|
| |