| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2977 |
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| Symbol | |
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| ID | 5354557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 3066933 |
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| End bp | 3067919 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640812028 |
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| Product | putative 2-hydroxyacid dehydrogenase |
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| Protein accession | YP_001348337 |
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| Protein GI | 152983831 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.269444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAG TGGTTCTCTA CAAACGTCTC TCCACGCCCC TGATGGAGCG CCTGCGCGAG
CGGGCCGAGG TGCTCCTGGT CGAGGAGCCC GGCCGCGACG GCCTAGCCCG CCTGCGCGAC
GCCCTGCCCG AGGCCCACGG CCTGCTCGGC GCGAGCTTGC GCCTGGACGC CGGGCTGCTC
GACCTGGCGC CGCGACTGGA AGCCATCGCC AGTGTCTCGG TGGGCGTCGA CAACTATGAC
ATCGACTACC TCGACCGCCG CGGCATCCTC CTCAGCAATA CCCCCGACGT GCTCACCGAG
ACCACCGCCG ATACCGGCTT CGCCCTGATC CTGGCCACCG CCCGGCGGGT GGTGGAGCTG
GCCGGCTGGG TGCGCGCCGG GGAATGGAAG AAGAGCATCG GCGCCGCCCA GTTCGGCACC
GACGTGCATG GCAAGACCCT CGGTATCGTC GGCATGGGCC GCATCGGCGA GGCCCTGGCC
CGGCGCGGGC ACCACGGTTT CGGCATGCGT GTGCTGTACC ACAGCCATAG CCCGAAGCCC
CGGGTCGAGG AACGCTACGC GGCGAGCTAC CGCTCCCTCG ACGCGCTGCT CGAGGAATCC
GACTTCGTCT GCCTGACCCT GCCGCTGACC GCCGCCACCG AAGGCCTGGT CGGTGCCGCG
CAGTTCGCCC GGATGCGCCC GCAGGCGATC TTCATCAACA TCTCCCGTGG CCGGGTGGTC
GACGAGGCGG CCCTGATCGA GGCCCTGGAC CAACGGCGGA TCCGCGCCGC CGGTCTCGAC
GTGTTCGAGC GCGAGCCGCT GTCTCCCGAC TCGCCGCTGC TACGCCTGCC GAACGTGGTG
GCCACCCCGC ACATCGGCTC GGCCACCGAG GAAACCCGCG AAGCCATGGC CCGCTGCGCG
GTAGACAACC TGCTGGCCGC CCTCGCCGGC GAGCGGCCGC TGAACCTGGT CAATCCTTCG
GCCTGGGCGC GACGCCAGCG CGCCTGA
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| Protein sequence | MKKVVLYKRL STPLMERLRE RAEVLLVEEP GRDGLARLRD ALPEAHGLLG ASLRLDAGLL
DLAPRLEAIA SVSVGVDNYD IDYLDRRGIL LSNTPDVLTE TTADTGFALI LATARRVVEL
AGWVRAGEWK KSIGAAQFGT DVHGKTLGIV GMGRIGEALA RRGHHGFGMR VLYHSHSPKP
RVEERYAASY RSLDALLEES DFVCLTLPLT AATEGLVGAA QFARMRPQAI FINISRGRVV
DEAALIEALD QRRIRAAGLD VFEREPLSPD SPLLRLPNVV ATPHIGSATE ETREAMARCA
VDNLLAALAG ERPLNLVNPS AWARRQRA
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