| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2975 |
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| Symbol | |
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| ID | 5358407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 3064259 |
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| End bp | 3066034 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640812026 |
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| Product | gluconate dehydrogenase |
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| Protein accession | YP_001348335 |
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| Protein GI | 152985531 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.299078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACGA CACTCAAACC GGTGGATGCG GTGGTGGTCG GCTTCGGCTG GACCGGAGCG
ATCCTGGCCA AGGAGCTGAC CGAGGCCGGG CTCAACGTGG TGGCGCTGGA GCGCGGCGAG
AACCGCGATA CCTATCCCGA CGGCGCCTAC CCCAACACCC TCGACGAGCT GACCTACAAC
ACCCGCGGCA AGCTGTTCCA GAATCTCTCC AAGAGTACCG TGAGCATCCG CCACGGGATC
AACGACACCG CGCTGCCCTA CCGCCAGCTC TCCGCCTTCC TTCCCGGCGA CGGCGTCGGT
GGCGCCGGCC TGCACTGGTC CGGCGTGCAC TTCCGGATCA TGCCCGAGGA GCTGCGCCTG
CGCAGCCATT ACGAGGAACG CTACGGCAAG AAATTCATCC CCGAAGGCAT GACCATCCAG
GACTACGGGG TCAGCTACGA GGAGCTGGAA CCGCACTTCG ATTTCGCCGA GAAGGTCTTC
GGTACCTCCG GCACCGCGCA TACGGTCAAG GGCCAGGTGG TCGGCAAGGG CAATCCGTTC
GCCGCCGACC GCTCGGACGA CTTCCCTCTG CCGGCGCTGC GCCAGGTGTA CTCCGCGCAA
CTGTTCCGCA AGGCCGCCGA GGAACTCGGC CTGCACCCCT ACGACCTGCC GGCGGCCAAC
GCTTCGGGGC CCTGGACCAA CCCCTACGGG GTGCAGATGG GACCGTGCAA CTTCTGCGGC
TTCTGCAGCG GCTACGCCTG CTACATGTAT TCCAAGGCCT CGCCGAACCT GAACATCCTC
CCGGCGCTGC GCCAGACCCC GCTGTTCGAA CTGCGCGCCA ACTGCAACGT GCTCAAGGTC
AACCTCGACA GCGACGGCAG GCAGGCCACC GGCGTGACCT ACGTCGACGC CCAGGGGCGC
GAGATCGTGC AGCCGGCGAA GCTGGTGATC ATCAGCGCCT TCCAGTTCCA CAACGTGCGC
CTGCTGCTGC TCTCCGGCAT CGGCAAGCCC TACGACCCGC GCACCGGCGA GGGCGTGGTG
GGGAAGAACT TCGCCTACCA GAACATGGCC ACCATCAAGG CGTTCTTCGA CAAGGACGTA
CACACCAACC CCTTCGTCGG CACCGGCGGC GGCGGCGTGG CGGTGGACGA CTTCAACGCC
GACAACTTCG ACCACGGCCC GCTGGGCTTC GTCGGCGGCT CGCCGATGTG GGTCAACCAG
GCCGGTTCCA AGCCGATCGG CGGCCTCGCC GTGCCGCCCG GCACGCCGAG CTGGGGCAGC
GGCTGGAAAC AGGCGGTCAA GGACGCCTAC ACGCACACCG TGTCGATGGA CGCCCACGGC
AGCAACATGA CCTACCGCGA CAACTACCTC GACCTCGACC CGACCTACAA GGACGCCTAC
GGCCAGCCAC TGCTGCGCAT GACCTTCGAC TGGAAGGACA ACGAGATCCG CATGAGCCGC
TACGTCACCG AGCACATGCG CAAGATCGCC GAGGCGATGA ACCCCAAGGC CATCTCGGTG
AGCGTGAAGA ACTTCGGCGA CCACTTCAAT ACGCGGGTCT ACCAGACCAC CCACCTGCTC
GGCGGGGCGA TCATGGGCAG CGATCCGAAG ACCAGCGTGC TCAACCGCTA CCTGCAGAGC
TGGGACGTGC ACAACGTCTT CGTCATGGGC GCCTCGGCCT TCCCCCAGGG CACCGGCTAC
AACCCCACCG GGCTGGTGGC GGCGCTGGCC TACTGGTCGG CCAAGGCGAT CCGCGAGCAA
TACCTGAAGA ACCCCGGTCC GCTGGTGCAG GCATGA
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| Protein sequence | MATTLKPVDA VVVGFGWTGA ILAKELTEAG LNVVALERGE NRDTYPDGAY PNTLDELTYN
TRGKLFQNLS KSTVSIRHGI NDTALPYRQL SAFLPGDGVG GAGLHWSGVH FRIMPEELRL
RSHYEERYGK KFIPEGMTIQ DYGVSYEELE PHFDFAEKVF GTSGTAHTVK GQVVGKGNPF
AADRSDDFPL PALRQVYSAQ LFRKAAEELG LHPYDLPAAN ASGPWTNPYG VQMGPCNFCG
FCSGYACYMY SKASPNLNIL PALRQTPLFE LRANCNVLKV NLDSDGRQAT GVTYVDAQGR
EIVQPAKLVI ISAFQFHNVR LLLLSGIGKP YDPRTGEGVV GKNFAYQNMA TIKAFFDKDV
HTNPFVGTGG GGVAVDDFNA DNFDHGPLGF VGGSPMWVNQ AGSKPIGGLA VPPGTPSWGS
GWKQAVKDAY THTVSMDAHG SNMTYRDNYL DLDPTYKDAY GQPLLRMTFD WKDNEIRMSR
YVTEHMRKIA EAMNPKAISV SVKNFGDHFN TRVYQTTHLL GGAIMGSDPK TSVLNRYLQS
WDVHNVFVMG ASAFPQGTGY NPTGLVAALA YWSAKAIREQ YLKNPGPLVQ A
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