Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_2894 |
Symbol | |
ID | 5354900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 2977584 |
End bp | 2978081 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640811945 |
Product | hypothetical protein |
Protein accession | YP_001348254 |
Protein GI | 152989665 |
COG category | [S] Function unknown |
COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGCGA TCATTCTCGA TTTCGGCAGC GACATCAAAG GCGACAGCCT GCTCGTCGGC TACGAAAACA AGATCGAAAT CATGTCCTAC AGCCACAACG TGGCGATGCA GGTCACCAAC GACGTCAGTA ACTCGGAGCG CACCTCCGGC AAACCCCACG TCGGCGAATT CACCCTCACC AAGTTCATCG ACACCTCGAC CCCGACCCTC AACGAGTATT GCTGCGCCGG CAAGCCGATC GCCGAGGCGA CCATCACCAT CGGCCGCAAC GCCGCCGAGG GCAACGGGCA GATCATGCCC TTCATCGTCT ACACCCTGAA CAACGTGGTG CTCTCCAACG TCAGCGTCAG CGGCGGCGCC GGCGGCAAGC CGGTGGAAAC CCTGTCGCTG AACTTCACCA AGATCAAGTG GGAGCTGACC GCGCAGAAGG ACGACGGCAC CAAGGAAGGC ACGGCCGCCT CGACCTGGGA CCTGGCCGCC AACCAGCTGG TCAAGTGA
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Protein sequence | MDAIILDFGS DIKGDSLLVG YENKIEIMSY SHNVAMQVTN DVSNSERTSG KPHVGEFTLT KFIDTSTPTL NEYCCAGKPI AEATITIGRN AAEGNGQIMP FIVYTLNNVV LSNVSVSGGA GGKPVETLSL NFTKIKWELT AQKDDGTKEG TAASTWDLAA NQLVK
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