| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2890 |
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| Symbol | |
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| ID | 5356510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 2971838 |
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| End bp | 2974387 |
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| Gene Length | 2550 bp |
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| Protein Length | 849 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640811941 |
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| Product | type VI secretion ATPase |
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| Protein accession | YP_001348250 |
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| Protein GI | 152984171 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAACTCG CCGCCCTGAT CGGCCGCCTC AACCCGGACT GTCGCCGCGC CCTGGAGCGC
GCCGCGCAAC GCTGCCTGCA ACGCACCCAT CATTACGTAG AGATCGAGCA CCTGCTACTG
GAGCTGCTGG ACATCGACGG CGGCGACTTC GCCTGCCTGC TGCCGCGCTT CGGCCTGGAG
CGCGACGCCC TGGTCGCCGA GATCAACCTG TCGCTGGAGC TGTTCAAGGC CGGCAATACC
CGCACTCCGG CGCTGTCCGC GCACACCATC GGCCTGCTCG AGGACGCCGT GGTCCACGCC
AGCGTGCTCG GCCAGGCGCA GATCCGTTCC GGCCTGCTGC TGCTCGCCCT GCTCGACCGC
GAGGAGCGCC GCGCCCTGTT GCTGAACAGC GCGTCGTCGC TGCTGCGGAT TCCCCACGAG
GCCTTGCAGG CCAACCTGCT GGAGTGGATC CAGGCCTCCC GCGAACAGCC GCCCGCGCCG
AACCGTCCGG CGGCAGGCGG CGACAAGCCG GAAAGCGCCC AGGACCCGCT GCTCGACCAG
TACACCCAGG ACCTCACCGC CGAGGCCCGC GCCGGGCGCA TCGACCCCAT AGTCGGGCGC
GACGGGGAGA TCCGCCAGTG CGTCGACATC CTCCTGCGCC GGCGGCAGAA CAACCCGATC
CTGGTCGGCG CGCCGGGCGT CGGCAAGACC GCGGTGGTCG AGGGCCTGGC CCTGCGCATC
GCCGCCGGCG AAGTGCCGCC GTCGTTGCAG GAGGTGATCC TGCGGGTGCT CGACCTCGGC
CTGTTGCAGG CCGGCGCCAG CATGAAGGGC GAGTTCGAGC AGCGCCTCAA GGGCGTGATC
GACGCCGTGC GCAACAGCGC GCAGCCGATC ATCCTGTTCA TCGACGAGGC GCACACGCTG
ATCGGCGCCG GCGGCGCGGA AGGCGGCAGC GACGCCGCCA ACCTGCTCAA GCCGGCCCTG
GCGCGCGGCG AGTTGCGCAC CCTGGCGGCC ACCACCTGGC TGGAATACAA GAAATACTTC
GAGAAGGACC CGGCGCTGAC CCGGCGCTTC CAGCTGGTCC AGGTCGAGGA GCCGGACGAG
GCCACCGCCG TGGAGATGCT GCGCGGCGTC GCCGGCAAGC TGGAACAGCA TCACGGCGTG
CAGATCATGG ACGCGGCCAT CGTCGATGCG GTGAAGCTGT CGCACCGCTA CATCTCCGGC
CGCCAGTTGC CGGACAAGGC CATCAGCGTG CTGGACACCG CCTGCGCCCG CGTCGCCCTG
GCCCAGCACG ACGTGCCGCC GGCCCTGGAG AACCTGCGCC ACCGTGAACT GGCGGTGGAG
GAAGAGCTGC AACGCCTGCG CCGCGAGCAG GCCACCGGCC TGGACCACAG CGTGCGCATC
ACCGGCCTGG AGCAGGAATC GGTGGGTAAC CTGTCGGCCA TCCGCGCCCT GGAAAAACGT
TGGGGCGAAG AACGCGAGGC GGTACGCGAA CTGCTGCAGT CACGCCGCGA ACTGCTGACC
CTGAGCGAGA GCGCCGACGC CGCCAAACCC GACGAAGAAC TCGACGGCCG CATCGACCAC
CTGGCCGCCG AACTGGCCCG CCTGGAAGCC GGCCTCGACG CCATCCGCGA GGATGATCCG
CTGGTGCCCG AACAGGTCGA CTCGAAGACC GTGGCCGCGG TGATCGCCGG CTGGACCGGC
ATCCCGGTTG GCAAGATGCT CGCCGACGAA GCCCATGCCA TCCGCACCCT GGCCCAGCGC
ATGGGCCAGC GGGTGATGGG CCAGGAGGCC GCCCTGGGCG CCATCGCCCA GCGCATCCAG
GCCTATCGCG CCGGACTCAG CGACCCGGCC AAGCCGGTCG GCGTATTCCT CCTGCCCGGC
CCCACCGGCG TGGGCAAGAC CGAGACCGCC TACGCCCTGG CCGACGCCCT CTACGGCGGC
GAACGCAACC TGATCAGCAT CAACCTCTCC GAGTACCAGG AGGCCCACAC CGTCAGCCAG
CTCAAGGGCG CCCCGCCCGG CTACGTCGGC TACGGCAGCG GCGGCGTGCT CACCGAAGCG
GTGCGCCGCA AGCCCTATTC GGTGGTGCTG CTGGACGAGA TCGAGAAAGC CCATCCGGAC
GTGCTGGAAG CCTTCTACAA CGTGTTCGAC AAGGGTGTGA TGGAAGACGG CACCGGCCTG
GTGGTGGACT TCAGGAACAC CGTGATCCTC GCCACCAGCA ACGTCGGCGC CGAACTGCTG
CTGGACAGCC CGGCCGAACA GGTCGCCACC CCGGCCTTCG ACGAGCGCCT GCGCAAAGTC
CTGCTGCAAA CCTTCCGCCC GGCGTTCCTC GCGCGCATGA CCGTGGTGCC TTACCGGCCG
CTGGAGGAAG CCACCCTGGA AGGCATCGTC GTGGCCAAGC TGGAAAAACT GCGGGAACGC
TACAAGGCCG CTACCGGCAA ACAGTTCGAC TTCGACCCGG CCATCGTCAA GGCCGTGCTC
GCCAAGTGCA GCGCGGCGGG CGCGCGGGAT ATCGAGAACG TGCTGATGGC GCAGGTGACG
GGGAAGTTGG CGGAGTGGGC ATTGGAGTAA
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| Protein sequence | MELAALIGRL NPDCRRALER AAQRCLQRTH HYVEIEHLLL ELLDIDGGDF ACLLPRFGLE
RDALVAEINL SLELFKAGNT RTPALSAHTI GLLEDAVVHA SVLGQAQIRS GLLLLALLDR
EERRALLLNS ASSLLRIPHE ALQANLLEWI QASREQPPAP NRPAAGGDKP ESAQDPLLDQ
YTQDLTAEAR AGRIDPIVGR DGEIRQCVDI LLRRRQNNPI LVGAPGVGKT AVVEGLALRI
AAGEVPPSLQ EVILRVLDLG LLQAGASMKG EFEQRLKGVI DAVRNSAQPI ILFIDEAHTL
IGAGGAEGGS DAANLLKPAL ARGELRTLAA TTWLEYKKYF EKDPALTRRF QLVQVEEPDE
ATAVEMLRGV AGKLEQHHGV QIMDAAIVDA VKLSHRYISG RQLPDKAISV LDTACARVAL
AQHDVPPALE NLRHRELAVE EELQRLRREQ ATGLDHSVRI TGLEQESVGN LSAIRALEKR
WGEEREAVRE LLQSRRELLT LSESADAAKP DEELDGRIDH LAAELARLEA GLDAIREDDP
LVPEQVDSKT VAAVIAGWTG IPVGKMLADE AHAIRTLAQR MGQRVMGQEA ALGAIAQRIQ
AYRAGLSDPA KPVGVFLLPG PTGVGKTETA YALADALYGG ERNLISINLS EYQEAHTVSQ
LKGAPPGYVG YGSGGVLTEA VRRKPYSVVL LDEIEKAHPD VLEAFYNVFD KGVMEDGTGL
VVDFRNTVIL ATSNVGAELL LDSPAEQVAT PAFDERLRKV LLQTFRPAFL ARMTVVPYRP
LEEATLEGIV VAKLEKLRER YKAATGKQFD FDPAIVKAVL AKCSAAGARD IENVLMAQVT
GKLAEWALE
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