Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_2872 |
Symbol | |
ID | 5359305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 2952310 |
End bp | 2953305 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640811923 |
Product | putative transmembrane sensor |
Protein accession | YP_001348232 |
Protein GI | 152983552 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.262603 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGACAC CCCTCCCCGC CGACAGCGAC ACCCTGGTCC AGGACGCCGC TCACTGGTGC ATGCGCCTGC ATGCCGAGGA CTGCAGCGAG GAAGAGCGCG CCGAGTTCCG TCGCTGGCTG GCGAGCGACC CGAGGCACGC CGACGAATAC GCGGCAATGG AAGAAATCTG GCAGCTCAGC GAGTTGCTCC CCCGCCGCCC CGCCGCCCCG GCGGCCGTCC AGGCACGGCC ACGCCCGCGG GCGTCCCGCC GGCGCCACTG GAAAAGCCAG GCGCGAGCCG CCGCGCTCGC CTTGTTCCTG CTCCCCGCCT CCGCCTACCT GGGCTGGCTG CAGGGCTGGA TACCTTCCAG CTACCAGCGC TACGCGGCGC AGGACAACAT CCGCCACGTC ACCCTTCCCG ACGGCAGCGA GGTAGAGCTT GATCTCAAGA CCCGCCTCAG CTTCGCCAAC TTCAGGGACA TCCGCCGCGT CGCCCTGGAC GAGGGCGAGG CCTATTTCCA TGTCACCCAC GATACGACCC ATCCATTCGT GGTCAGAGCC GGCAAGGGCT CGATCACCGT CACCGGCACC CGCTTCAATG TCTGGAAGTA CCAGGACAAC GTCGTCGTCA CCGTGACCGA AGGCTCGGTG AAGGTTCGCA GCGAAGGATC GGGCAGCGAC AGCAGCCTGA CCCCGGGCAT GCAGGCAAGC TACTACCCCG GACTGCTGCA ACCACTGGTC GAGGCGGTCG ACACCCATCA GGCCCTGGCC TGGCGCGAAG GTCGCCTGGT TCTCGACGAC CTGCCACTGG CCCAGGCCCT GCCGCTGATC AATCGCTACC TGGAACATCC GCTGGTCCTT ACCGACAAGG CCAGCGCCGA ACTGCGCATC GGCGGCATCT ACAGCACCCG CGAGATACGC AACCTGGTCG AGGCCCTGCC AAAGGTCCTG CCGGTCGACC TCGAGCACCG CGACGACGGC AGCATCCGCA TCAGCAGCCG CTACGCCCAA CTCTGA
|
Protein sequence | MKTPLPADSD TLVQDAAHWC MRLHAEDCSE EERAEFRRWL ASDPRHADEY AAMEEIWQLS ELLPRRPAAP AAVQARPRPR ASRRRHWKSQ ARAAALALFL LPASAYLGWL QGWIPSSYQR YAAQDNIRHV TLPDGSEVEL DLKTRLSFAN FRDIRRVALD EGEAYFHVTH DTTHPFVVRA GKGSITVTGT RFNVWKYQDN VVVTVTEGSV KVRSEGSGSD SSLTPGMQAS YYPGLLQPLV EAVDTHQALA WREGRLVLDD LPLAQALPLI NRYLEHPLVL TDKASAELRI GGIYSTREIR NLVEALPKVL PVDLEHRDDG SIRISSRYAQ L
|
| |