| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2871 |
|---|
| Symbol | |
|---|
| ID | 5355496 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 2951035 |
|---|
| End bp | 2952210 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640811922 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001348231 |
|---|
| Protein GI | 152983776 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.518674 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGACGAA CCCGTAGTAC TCGTCGCGCA CTGCTCGTCG CAGTCTGCCT CAGCCCCCTG
ATCGCCCTGG CCGCCTGGCA GGCCTACCCG TTCCGCAGCA CCAGCTTCGA TACCGTGAGC
GTCAGCCGCG GCAGCATCGA GAGCAGCGTC TCGGCGCTCG GCACCCTGCA GCCGCGGCGC
TACGTCGACG TCGGCGCCCA GGCCTCCGGG CAGATCCGCA AGTTGCACGT CGAGGCCGGG
GACGATGTGA CGGAAGGCCA GTTGCTGGTC GAGATCGACC CCTCCACCCA GCAGGCCAAG
GTGGATGCCG GCCGCTATTC GATCGAGATG CTCAAGGCAC AACTGGCCGA GCAACGCGCC
CAGTACACCC TCGCCCGCCA GCAGTACCAG CGCCAGCAGC GACTGGCCGC CGGCGGCGCG
ACGCGCACCG AGGACGTGCA GAGCGCCCAG GCGCAGATGC TCGCCACCCA GGCGCGGATC
GACATGTACC AGGCGCAGAT CCGCCAGGCC CAGGCCTCGC TGCGCAGCGA CGAAGCCGAA
CTCGGCTATA CCCGCATCTA CGCGCCGATG TCCGGCACGG TGGTGGCCGT CGATGCGCGC
GAAGGCCAGA CCCTCAACGC CCAGCAGCAG ACCCCGCTGA TCCTGCGGAT CGCCAGATTG
TCGCCGATGA CCGTCTGGGC CCAGGTCTCC GAAGCCGACA TCGGCCGGGT CAAGCCCGGC
ATGCCGGCCT ACTTCACGAC TCTCAGCGGC GAAGGCCGGC GCTGGACCGG CAAGGTCCGG
CAGATCCTCC CGGTGCCGCC CAAGCCGCTG GATCAGAGCA ACCAGGGCGG CGGCAGCCCC
ACCAGCGGCA GCGGCGGGCA GAGCGGCAGC GGCCGGGTGG TGCTGTATAC CGTGCTGGTC
GACGTGGACA ACGGCGACCA CCAACTGATG GCGGAAATGA CCGCCCAGGT GTTCTTCGTC
GCCGCCACCG CGGAAAACAT CCTCACCGCA CCGGTCGCCG CCATTCACGA CGACGGCAAG
GGCGGCCAGG TCGCCTGGGT GGTCGGCAGC AACGGCAAGC CGCAGAGCCG CCAGATCAGG
ACCGGCATCA GCGACCGCCT GCGGGTGCAG GTACTTGCCG GCCTGGAGGA AGGCGACCGC
CTGCTGATGG CCGTTCCCGA CGGCAGCGAC AGCTGA
|
|---|
| Protein sequence | MRRTRSTRRA LLVAVCLSPL IALAAWQAYP FRSTSFDTVS VSRGSIESSV SALGTLQPRR
YVDVGAQASG QIRKLHVEAG DDVTEGQLLV EIDPSTQQAK VDAGRYSIEM LKAQLAEQRA
QYTLARQQYQ RQQRLAAGGA TRTEDVQSAQ AQMLATQARI DMYQAQIRQA QASLRSDEAE
LGYTRIYAPM SGTVVAVDAR EGQTLNAQQQ TPLILRIARL SPMTVWAQVS EADIGRVKPG
MPAYFTTLSG EGRRWTGKVR QILPVPPKPL DQSNQGGGSP TSGSGGQSGS GRVVLYTVLV
DVDNGDHQLM AEMTAQVFFV AATAENILTA PVAAIHDDGK GGQVAWVVGS NGKPQSRQIR
TGISDRLRVQ VLAGLEEGDR LLMAVPDGSD S
|
|---|
| |