Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_2821 |
Symbol | |
ID | 5358964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 2862875 |
End bp | 2865049 |
Gene Length | 2175 bp |
Protein Length | 724 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640811872 |
Product | hypothetical protein |
Protein accession | YP_001348181 |
Protein GI | 152984631 |
COG category | [S] Function unknown |
COG ID | [COG1289] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.596664 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAGGGGC TGAAGCTCTA CGCGCGGATG CTCTGGCGGC CACCGCGGGA AACCCTGCTG TTCGCCCTGC GCACCGTCGT CGCCGGCCTG CTGACCCTGT ACCTGGCCTT CCTGTTCGAC CTGGAGCAGC CGAAGTGGGC GCTGATGACC GTGGTCATCG TCAGCCAGCC GCTGGCCGGG ATGGCCTTGA AGCGCAGCTT CGCCCAGGTC TTCGGGACCT TCGCCGGGGC CGTGGTGGCG GTGCTGATCA TGGCGCTGTT CGCCCAGCAG CCGTTGCCGT TCTTCATCGC CCTGAGCCTC TGGCTGGCGC TCTGTACCGC CGGCGGCACG CTGCTGCGCT ACACCGATTC GCACGCCTTC GTGCTCAGCG GCTTCACCGC GGTGATCGTC GCGGTGCTGT CGATTCCCGA TCCGGAAAAC ACCTTCATGC TCGCCGTGGT GCGGGTCACC GAGACCCTGC TGGGTGTCGC CTGCGTGGCC CTGGTCAGCC TGCTCAGCGC GCGTCCGCAG GCGGTGGCGA AGGGCTATTT CGCCCAGGTC GACGGCCTGA TCCGCAGTAC CGCGCGGCAC GCCGCGGCGG TGATCCGCGG CGACGAGGGC GACGAGTCGT TCAACCAGCG GCAGATGCAA CTGGTCGCCA GCATCACCGC GCTGGACGGC CTGCGCCGGC ACCTCTACTT CGATGCGCCG AACCTGCGCC GCGCCGATGG CCTGGTGCAG TTGCTGGGCA ACCTGCTGGT GCTCATGGCC TCGCGGCTGT TGCTGTTGCG CCAGCATCGC CTGCTGGTGC GGGCGCACTG GGTCGGGCCG TTGCCGGCGG ATATCCAGGC GCTGCTGGAT CGTGCGTTGC GGGTGCTGGA CGCGTTGGCC GAGCAGGGGC GTGCGGTACC GTCCGAGGTG CTGGAGGAAT TCCAGACGGT ACGCCAGGCC TTCGACGCCG CGGCGGCGCG CGCGGAATCC TACGACGAGG CGCTGAGCCC GGCGTTGCGT CCGCAGGTGG CGATCCTGCG CTGGGAGTAT GCGCGGCTGT TCCAGCGCCT GGGCGAAGTG CTCGAACTCA ACGATGCGAT TCAGTCCGGC CGCCAGGCCA GCAGTTTCTA CCGCCGTGGC CAGGCGCAGG CGCTGCATCT GGACTGGGCG CTGGCCTCGA TGAATGCCGT GCGCGCTTTC GTCGCCTTGT CCTGCGCTGC CTGGCTGTGG ATCACCAGCG CCTGGAACGG CGCCCTCAGC AGCCTGTTGC TGGTCGGCGT GATGTGCTCG CTGATGGCGA CCTTTCCGCG TCCGCTGCTG GCGGCGCAGA ATTTCCTGCG CGGGCTGCTG CTGGCGATCC TGATTTCGGC GGCGCTGCTG TTCGTGCTGT TGCCGGCATC CGCCGACTTC GAATGGCTGG CGCTGTGGAT GGCGTTGCTG CTGTACCTGG TCGCGATCGG CCTGAGCAGC CCGCTGACCG CCGGCATCGC CATGGGCATC GGCCTGGAGA CCTTGCTGAT GGTGGCGCTG CAGAACATCG CGGTGTACTA CAGCGACGCC TCGCAGTGGT TCGAGTTCGT CGGTGGTTTC CTGGCCGCGG CGGTCCTCGC GCTGGCGGTG TTCGCCCTGG TCTATCCGTT CCGCGCCGAC CCGCGCCTGC GCCGCCTGCT GTACCTGTCG CGCCAGGACG TCGCGGAAAT GTCGCGCTGC GAGGCCAGCG AGGCGCAGCG CTTCGCCTTC GAGACACGGA TGATCGATCG CCTGGCGGTG ATGGTCGGCC TGTTGCCGGC GAGCCAGGAT GCCCGTTCGG CGGAGCGCTT CCAGTGCGCC CTGGGCTGCG TGGTGATGGG CGTGGCGTTG AATCGCCTGC GCGAGCCGCT GCATGACGCC GGGGTGGTGC CGCTGGAGTT GCAGCCGCTG CTGCGCGAGG CGCTGCGCGA GATCGCCGCC TACGTGGCCG GCGGTGCGGG CGCCCCGCGA CACGACCTCG CGCTGGCCGC CCTGCGGCGT TTCGGCCGGG GCCTGGAGGC TTTGCTGGCG CAGCCGTCGA ACAACCTGGG GGCGACGCGG CAGCGCTTCA TCATGAATGT CGCGGTACTG ATCCTGCAGC AGTCGCTGCA ACGCTATCGG ACGCTGCTGG AGGAGGACCG CGGCACACCG GCGGTCGTCG AAGAGCGAGA AGAGGAGGGC GGACATGCCC GCTGA
|
Protein sequence | MEGLKLYARM LWRPPRETLL FALRTVVAGL LTLYLAFLFD LEQPKWALMT VVIVSQPLAG MALKRSFAQV FGTFAGAVVA VLIMALFAQQ PLPFFIALSL WLALCTAGGT LLRYTDSHAF VLSGFTAVIV AVLSIPDPEN TFMLAVVRVT ETLLGVACVA LVSLLSARPQ AVAKGYFAQV DGLIRSTARH AAAVIRGDEG DESFNQRQMQ LVASITALDG LRRHLYFDAP NLRRADGLVQ LLGNLLVLMA SRLLLLRQHR LLVRAHWVGP LPADIQALLD RALRVLDALA EQGRAVPSEV LEEFQTVRQA FDAAAARAES YDEALSPALR PQVAILRWEY ARLFQRLGEV LELNDAIQSG RQASSFYRRG QAQALHLDWA LASMNAVRAF VALSCAAWLW ITSAWNGALS SLLLVGVMCS LMATFPRPLL AAQNFLRGLL LAILISAALL FVLLPASADF EWLALWMALL LYLVAIGLSS PLTAGIAMGI GLETLLMVAL QNIAVYYSDA SQWFEFVGGF LAAAVLALAV FALVYPFRAD PRLRRLLYLS RQDVAEMSRC EASEAQRFAF ETRMIDRLAV MVGLLPASQD ARSAERFQCA LGCVVMGVAL NRLREPLHDA GVVPLELQPL LREALREIAA YVAGGAGAPR HDLALAALRR FGRGLEALLA QPSNNLGATR QRFIMNVAVL ILQQSLQRYR TLLEEDRGTP AVVEEREEEG GHAR
|
| |