| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2807 |
|---|
| Symbol | glyA2 |
|---|
| ID | 5355737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 2847288 |
|---|
| End bp | 2848544 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640811858 |
|---|
| Product | serine hydroxymethyltransferase |
|---|
| Protein accession | YP_001348167 |
|---|
| Protein GI | 152983793 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0316342 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAGCA AGCATGACCA GATCCGCGGC TACGACGACG AACTGCTCGC CGCGATGGAC
GCCGAAGACC GGCGGCAGGA AGACCACATC GAACTGATCG CCTCGGAGAA CTACGCCAGC
AAGCGGGTCA TGCAGGCGCA GGGCAGCGGC CTGACCAACA AGTATGCCGA GGGCTATCCG
GGCAAGCGCT ACTACGGCGG CTGCGAACAC GTCGACAAGG TCGAGCGGCT GGCCATCGAC
CGCGCCAGGC AACTGTTCGG CGCCGACTAC GCCAACGTCC AGCCGCACTC CGGCTCCTCG
GCCAACGCCG CGGTGTACCT GGCGCTGCTC AACGCCGGCG ACACCATCCT CGGCATGAGC
CTGGCCCATG GCGGTCATCT CACCCACGGC GCCAAGGTGT CCTCCTCCGG CAAGCTGTAC
AACGCCGTGC AGTACGGCCT GGACACCGCC ACCGGGCTGA TCGACTACGA CGAAGTCGAG
CGCCTGGCCG TGGAGCATAA GCCGAAGATG ATCGTCGCCG GCTTCTCCGC CTACTCCAAG
ACCCTCGACT TCCCGCGCTT CCGCGCCATC GCCGACAAGG TCGGCGCGCT GCTGTTCGTC
GACATGGCCC ACGTCGCCGG GCTGGTCGCC GCCGGCCTCT ACCCGAACCC GATCCCCTTC
GCCGACGTGG TCACCACCAC CACCCACAAG ACCCTGCGCG GCCCGCGCGG CGGCCTGATC
CTGGCGCGCG CCAACGAGGA GATCGAGAAG AAGCTCAACT CCGCGGTATT CCCCGGCGCC
CAGGGCGGCC CGCTGATGCA CGTGATCGCG GCCAAGGCGG TGTGCTTCAA GGAAGCGCTG
GAACCGGGCT TCAAAGACTA CCAGGCGCAG GTGATCCGCA ACGCCCGAGC GATGGCCGAG
GTATTCATCG GGCGCGGCTA CGACGTGGTT TCCGGCGGTA CCGACAACCA CCTGATGCTG
ATCAGCCTGG TGAAGCAGGG CCTGACCGGC AAGGCCGCCG ACGCTGCGCT CGGCGCGGCG
CACATCACGG TGAACAAGAA CGCCGTGCCG AACGACCCGC AGAGCCCGTT CGTCACCTCC
GGCATCCGCA TCGGCACCCC GGCGGTGACC ACTCGCGGTT TCCGCGAGGG CGAGTGCCGA
GAACTGGCCG GCTGGATCTG CGACATCCTC GACGACATCG ACAATCCCGA GGTCAGCGAA
CGGGTCAGGG GCCAGGTCGG CGAATTCTGC CGGCACTTCC CGGTCTACGC TGATTGA
|
|---|
| Protein sequence | MFSKHDQIRG YDDELLAAMD AEDRRQEDHI ELIASENYAS KRVMQAQGSG LTNKYAEGYP
GKRYYGGCEH VDKVERLAID RARQLFGADY ANVQPHSGSS ANAAVYLALL NAGDTILGMS
LAHGGHLTHG AKVSSSGKLY NAVQYGLDTA TGLIDYDEVE RLAVEHKPKM IVAGFSAYSK
TLDFPRFRAI ADKVGALLFV DMAHVAGLVA AGLYPNPIPF ADVVTTTTHK TLRGPRGGLI
LARANEEIEK KLNSAVFPGA QGGPLMHVIA AKAVCFKEAL EPGFKDYQAQ VIRNARAMAE
VFIGRGYDVV SGGTDNHLML ISLVKQGLTG KAADAALGAA HITVNKNAVP NDPQSPFVTS
GIRIGTPAVT TRGFREGECR ELAGWICDIL DDIDNPEVSE RVRGQVGEFC RHFPVYAD
|
|---|
| |