| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2766 |
|---|
| Symbol | |
|---|
| ID | 5355579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 2789455 |
|---|
| End bp | 2790804 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640811817 |
|---|
| Product | MFS family transporter |
|---|
| Protein accession | YP_001348126 |
|---|
| Protein GI | 152985983 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | [TIGR00895] benzoate transport |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.648112 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACGC CCGCCAAGAA CAACAAGATC GACGTCCAGG CCTTCATCGA CGCGCAGGCG
GTCTCCGCCT TCCAGTTGCG GGTCCTGCTG CTGTGCTTCC TGATCGTCGC CATGGACGGC
TTCGACACCG CCGCCATCGG TTTCATCGCC CCGGCCCTGG CCCATGACTG GCAACTCAGC
CCGGCGCAGC TCAGCCCTAT CCTCGGCGCG GCGCTGGCCG GGCTGGCCCT CGGCGCGTTC
GCCGCCGGTC CGCTGGCCGA TCGCTTCGGA CGCAAGACCA TCCTTCTCCT CTCGGTGCTG
TTCTTCGGCG GCTGGAGCCT CGCCTCGGCC TACGCCGGCT CGGTGGAAAG CCTGGCCCTG
CTGCGCTTCC TCACCGGCCT CGGGCTTGGC GGGGCGATGC CCAACGCGAT CACCCTGACC
TCCGAATACT GCCCGCGCCG GCACCGCGCG CTGATGGTCA CCGCGATGTT CTGCGGCTTC
ACCCTCGGTT CGGCGCTGGG CGGCCTGCTC GCCGCGCGGA TGGTCCCGGC GCTGGGCTGG
CAGAGCGTCC TGCTGCTCGG CGGCGGCCTG CCCCTGGCGA GCCTGCCGTT GCTCTGGCTG
TGCCTGCCGG AATCGGTGCG TTTCCTCGCC CGGCGCACAC CGGGCTCGCC GCGCCTGCGC
CGGAGCCTGG AACGCCTGGG GCGCCTGCCG GAGAACTGGG ACGGCCGCCT CGAAGCGCCC
GCCGAGGAAG CCGCCGGCTC GCCGCTGCGA CAGATCCTCG GCGCCGAACT GCGCCGTGGC
ACCCTGCTGC TCTGGGCCAC CTTCTTCATG GGGCTGCTGA TCATCTACCT GCTGACCAAC
TGGCTGCCGA CGCTGATCGG CGGCACTGGC TTCAGCCTCG CCGAGGCTGC GCTGATCAGC
GCCATGTTCC AGCTCGGCGG GACCCTCGGC GCGATCCTGC TGGGCAGCGC CATGGACCGC
TTCGAGGCGC ACCGGGTGCT GAGCCTGGCC TACCTCGGCG GCGCGCTGTT CATCCTCGGC
ATCGCCAGCC TCTACCACAG CTTCGCCCTG CTGGCGCTGT GCGTCGCCGG CGTCGGCTTC
TGCATCAGCG GCTCGCAGGT CGGCGCCAAC GCCCTGGCCG CCGACTTCTA TCCGACCCGC
AGCCGCGCCA CCGGGGTCAG TTGGGCCCTC GGCCTGGGCC GCATCGGCTC GATCGTCGGC
TCTCTCGGCG GCGGCGCCCT GCTCGGCCTG GGCCTGGGCT TCAGCGGCAT CCTCGCGCTG
CTGGTGATCC CGGCGCTGCT CGCAGCCATC GCCGTACACC GCCTGGGCCG GTTGCGCCGC
CGGGCCGGGC TGTCTTCCGC CACCCTCTGA
|
|---|
| Protein sequence | MPTPAKNNKI DVQAFIDAQA VSAFQLRVLL LCFLIVAMDG FDTAAIGFIA PALAHDWQLS
PAQLSPILGA ALAGLALGAF AAGPLADRFG RKTILLLSVL FFGGWSLASA YAGSVESLAL
LRFLTGLGLG GAMPNAITLT SEYCPRRHRA LMVTAMFCGF TLGSALGGLL AARMVPALGW
QSVLLLGGGL PLASLPLLWL CLPESVRFLA RRTPGSPRLR RSLERLGRLP ENWDGRLEAP
AEEAAGSPLR QILGAELRRG TLLLWATFFM GLLIIYLLTN WLPTLIGGTG FSLAEAALIS
AMFQLGGTLG AILLGSAMDR FEAHRVLSLA YLGGALFILG IASLYHSFAL LALCVAGVGF
CISGSQVGAN ALAADFYPTR SRATGVSWAL GLGRIGSIVG SLGGGALLGL GLGFSGILAL
LVIPALLAAI AVHRLGRLRR RAGLSSATL
|
|---|
| |