Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_2749 |
Symbol | |
ID | 5356100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 2773755 |
End bp | 2774570 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640811800 |
Product | putative transcriptional regulator |
Protein accession | YP_001348109 |
Protein GI | 152983529 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCCACG CCAATACGCC CCGCGACTGG GTTCGCCGCG CGCCGCGACA GGGCGCGGTG GAACGCATCG AGGCCTACTT CGCCGGCCAC GGCTACGATC CGCATCGCCA CGACACCTAT GCCATCGGCC AGACCCTGGC CGGCGTGCAG AGCTTCCGCT ACCGCCACAG CCAGCGTCAC AGCCTGCCGG GCGGCTGCCT GGTGCTGCAT CCCGACGAAT TGCACGACGG CGAGGCCGGC AGCCAGGAAG GGTTCCGCTA CCGGATGCTC TACGTCGAGC CGGCGCTGAT CCAGCAGGCC CTCGGCGGCC GGCCGCTGCC GTTCGTGCGC GGGGGCTTGT CCGCCGACCT GCGCCTGGTC GCCGCCAGCC GGGCCCTGCT ACAGGCCATG GATACCCCGC TGGAGCCGCT GGAAGAACAG GACGCCCTGT TCGAACTCGC CCACGCCCTC GACGCCGCGG CCGGCAACCG GGCGCGCGGC AGGCGCCACG TCGACTTCGT CGCCGCCGAG CGCGCCCGGC AGTACATCCA CGCGCACCTG GAACGCCCGC TGAGCCTCGA CGAACTGGCG CAGGTCGCCC AGCGCGAACG CTGGAGCCTG TCGCGCGATT TCCGCGCGCT GTTCGGCACC AGTCCCTACC GCTATCTGGT CCAGCGCCGC CTGGACATCG CCCGCCGGCT GATGCTCGGC GGCCAGTCGC TGGCCGAAGC CGCGCTCGCC GCCGGGTTCG TCGACCAGAG CCACATGACC CGCCATTTCG GCCAGAGCTA CGGCCTGACG CCGGCACGCT GGCTGCGCAT GCTCGGCGGC GACTAG
|
Protein sequence | MSHANTPRDW VRRAPRQGAV ERIEAYFAGH GYDPHRHDTY AIGQTLAGVQ SFRYRHSQRH SLPGGCLVLH PDELHDGEAG SQEGFRYRML YVEPALIQQA LGGRPLPFVR GGLSADLRLV AASRALLQAM DTPLEPLEEQ DALFELAHAL DAAAGNRARG RRHVDFVAAE RARQYIHAHL ERPLSLDELA QVAQRERWSL SRDFRALFGT SPYRYLVQRR LDIARRLMLG GQSLAEAALA AGFVDQSHMT RHFGQSYGLT PARWLRMLGG D
|
| |