| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2728 |
|---|
| Symbol | catR |
|---|
| ID | 5355594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 2751886 |
|---|
| End bp | 2752758 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640811779 |
|---|
| Product | transcriptional regulator CatR |
|---|
| Protein accession | YP_001348088 |
|---|
| Protein GI | 152985661 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.705186 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCTTC GTCACCTGCG CTACTTCCAG GCGCTCGCCC GGACCCTCAA CTTCACCCGC
GCCGCCGAGC AGCTGCACAT CGCCCAGCCA CCGCTGAGCC GGCAGATCCG GCAGCTCGAG
GAAACGCTCG GGGTGGCCCT GCTGGAACGC GGCCGGCCGC TGCGCCTGAC CGAGGCCGGG
CGCTTCTTCC ACGAGCAGAG CGCGACCCTG CTGGAACAGC TGGAAAGCCT CTGCGACAGC
ACGCGGCGGA TCGGCGAGGG CCAGCGCCAG TGGTTCGGCA TCGGCTTCGT GCCCTCGGCG
CTGTACGGCG TGCTGCCGGA GCTGATCCGT CACCTGCGCG GCGATCCGGA GCTGGAGCTG
GGCCTGCTGG AGATGACCAC CCTGCAGCAG GTCGAGGCGC TGAAGAGCGG ACACATCGAC
ATCGGCTTCG GGCGCATCCG CATCGACGAC CCGGCGATCC GCCAGAGCGT GCTCAGCGAA
GAGCCGCTGG TCGCCGCCCT GCCCGCCGGC CACCCGTTGC TCGGCCAGCC GCTGAGCCTG
GAGCGCCTGT CGCGCGAGCC GTTCGTGCTC TACCCCGGCC AGCCGCGGCC GAGCTACGCC
GACCACGTGC TGGCGCTGTT CGCCACCCAC GGCCTGAGCC TGCGCGTGAC GCAATGGGCC
AACGAGATGC AGACCGCCAT CGGCCTGGTC GCCGCCGGCC TCGGCGCGAC CCTGGTACCG
GCCTCGGTGC AGTTGCAGCA CCGCGACGAC GTCGCCTACC AGGCCCTGGC CGACGCCTCC
CTGACCTCGC CGATCATCGT CAGCCGGCGC CAGGGCGACG GCTCGCCGCA CCTGCGGCGC
TGCCTGGCGC TGATCGGCCG CGACGACGCC TGA
|
|---|
| Protein sequence | MELRHLRYFQ ALARTLNFTR AAEQLHIAQP PLSRQIRQLE ETLGVALLER GRPLRLTEAG
RFFHEQSATL LEQLESLCDS TRRIGEGQRQ WFGIGFVPSA LYGVLPELIR HLRGDPELEL
GLLEMTTLQQ VEALKSGHID IGFGRIRIDD PAIRQSVLSE EPLVAALPAG HPLLGQPLSL
ERLSREPFVL YPGQPRPSYA DHVLALFATH GLSLRVTQWA NEMQTAIGLV AAGLGATLVP
ASVQLQHRDD VAYQALADAS LTSPIIVSRR QGDGSPHLRR CLALIGRDDA
|
|---|
| |