| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2709 |
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| Symbol | |
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| ID | 5353930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 2726007 |
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| End bp | 2729138 |
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| Gene Length | 3132 bp |
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| Protein Length | 1043 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640811760 |
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| Product | RND efflux transporter |
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| Protein accession | YP_001348069 |
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| Protein GI | 152986543 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCGT CCCGCCCGTT CATCCTGCGG CCGGTCGCGA CCACCCTGCT GATGGTGGCG
ATCCTGCTCT CGGGCCTGAT CGCCTACCGC TTCCTGCCGA TCTCGGCGTT GCCGGAAGTG
GACTACCCGA CCATCCAGGT GGTCACCCTG TACCCCGGCG CCAGCCCGGA GATCATGACC
TCGTCGATCA CCGCGCCGCT GGAGAACCAG CTCGGGCAGA TCCCCGGGCT CAACGAGATG
TCCTCCAGCA GCTCCGGCGG CGCCTCGGTG ATCACCCTGC AGTTCAGCCT GCAGAGCAAC
CTCGACGTCG CCGAGCAGGA AGTCCAGGCA GCGATCAACG CCGCGCAGAG CCTGCTGCCC
AACGACCTGC CGAACCAGCC TGTATTCAGC AAGGTGAACC CGGCGGACGC GCCGATCCTG
ACCCTGGCGG TGATGTCCGA CGGCATGCCG CTGCCGCAGA TCCAGGACCT GGTGGATACC
CGCCTGGCGC AGAAGATCTC GCAGATCTCC GGGGTCGGCC TGGTCAGCAT CAGCGGCGGC
CAGCGCCCGG CGGTACGGGT GCGCGCCAAC CCGACGGCGC TGGCCGCGGC GGGGTTGAGC
CTGGAGGACC TGCGCAGCAC GGTGACCAGC AACAACCTCA ACGGCCCCAA GGGCAGCTTC
GACGGCCCGA CCCGCGCCTC GACCCTGGAC GCCAACGACC AGTTGCGCTC GGCCGACGCC
TACCGCGACC TGATCATCGC CTACAAGAAC GGCTCGCCGC TGCGCATCCG CGACGTCGCC
AGCGTCGAGG ACGATGCCGA GAACGTGCGC CTGGCCGCCT GGGCCAACAA CCTGCCGGCG
GTGGTGCTGA ACATCCAGCG CCAGCCGGGG GCCAACGTGA TCGAAGTGGT CGACCGGATC
AAGGCGCTGC TGCCGCAGCT GCAATCGACC CTGCCGGGCA ACCTCGACGT GCAGGTGCTG
ACCGACCGCA CCACCACCAT CCGCGCCTCG GTCAAGGACG TGCAGTTCGA GCTGGCGCTG
GCGGTGGCGC TGGTGGTGAT GGTCACCTTC CTGTTCTTGC GCAACGTCTA TGCCACCCTG
ATCCCCAGCT TCGCCGTGCC GCTGTCGCTG ATCGGCACCT TCGGCGTGAT GTACCTGTCC
GGCTTCTCGA TCAACAACCT GACCCTGATG GCGCTGACCA TCGCCACCGG CTTCGTGGTC
GACGACGCGA TCGTCATGGT GGAGAACATC GCCCGCTACC TGGAGCAGGG CGACTCGCCG
CTGGAAGCGG CGCTCAAGGG CTCGAAGCAG ATCGGCTTCA CCATCATCTC GCTGACCTTC
TCGCTGATCG CCGTGCTGAT CCCGCTGCTG TTCATGGGCG ACGTCGCCGG GCGGCTGTTC
CGCGAGTTCG CCATCACCCT GGCGGTGGCG ATCCTGATTT CCGGCTTCGT CTCCCTGACC
CTTACGCCGA TGCTCAGCGC CAAGCTGCTG CGCCACATCG ACGAGGACCA GCAGGGCCGC
TTCGCGCGCG CCGCGGGACG GGTCATCGAT GGCCTGATCG CACATTACGC CAAGGCCCTG
CGGGTGGTCC TGCGGCACCT GCCGCTGACC CTGCTGGTGG CCATCGCCAC CCTGGCGCTG
ACCGCGCTGC TCTACCTGGC CATGCCCAAG GGCTTTTTCC CGGTGCAGGA CACCGGGGTG
ATCCAGGGCG TCGCCGAAGC GCCGCAGTCG ATCTCCTTCC AGGCCATGTC CGAGCGCCAG
CGCGCCCTTG CCGAGGTGGT GCTGAAGGAC CCGGCGGTGG CCAGCCTGTC CTCCTACATC
GGCGTCGACG GCAGCAACCC GACCCTCAAC ACCGGCCGCC TGCTGATCAA CCTCAAGCCG
CACAGCGAAC GCGACGTCAC CGCCAGCGAA GTGATCCAGC GCCTGCAGCC CGAGCTCGAC
CACCTGGCCG GGATCAAGCT GTACATGCAG CCGGTGCAGG ACCTGACCAT CGAGGACCGG
GTCGCCCGCA CCCAGTACCA GTTCACCTTG CAGGACGCCG ACCCGGACGT GCTCGCCGAG
TGGGTGCCGA AGCTGGTGGC GCGGCTGCAG GAGTTGCCGC AGCTCGCCGA TGTCGCCAGC
GACTGGCAGG ACAAGGGCCT GCAGGCCTAC CTGAACATCG ACCGCGACAC CGCCTCGCGC
CTCGGCGTGA AGCTCTCCGA CATCGACAGC GTGCTCTACA ACGCCTTCGG CCAGCGGCTG
ATCTCGACCA TCTTCACCCA GGCCACCCAG TACCGCGTGG TACTGGAGGT GGCGCCGCAG
TTCCAGCTCG GCCCGCAGGC CCTGGAGCAG CTCTACGTGC CGTCCAGCGA CGGCACCCAG
GTGCGCCTGT CGAGCCTGGC GAAGGTGGAG GAGCGGCATA CCCTGCTGGC GATCAACCAT
ATCGCCCAGT TCCCCTCGGC GACCCTGTCG TTCAACCTGG CCAAGGGTTA CTCCCTGGGC
GAGGCGGTCG AGGCGATCCG TGGCGTCGAG GCCAGCCTGG AGCTGCCGCT GAGCATGCAG
GGCAGCTTCC GTGGCGCGGC GCTGGCCTTC GAGGCTTCGC TGTCGAATAC GCTGCTGCTG
ATCCTCGCCT CGGTGGTGAC CATGTACATC GTCCTGGGCA TCCTCTACGA GAGCTTCATC
CATCCGGTGA CCATCCTCTC GACCCTGCCT TCGGCCGGGG TCGGCGCGCT GCTGGCGCTG
ATGCTGGCGG GGCAGGAGAT CGGCATCGTG GCGATCATCG GCATCATCCT GCTGATCGGC
ATCGTCAAGA AGAACGCGAT CATGATGATC GACTTCGCCC TAGACGCCGA ACGCAACGAA
GGCAAGCCGC CCCATGAGGC GATCTACCAG GCCTGCCTGC TGCGCTTCCG GCCGATCCTG
ATGACCACCA TGGCCGCGCT GCTCGGCGCG CTGCCGCTGA TGCTCGCCGG CGGCGCCGGC
GCCGAGCTGC GCCAGCCGCT GGGCATCACC ATGGTCGGCG GGCTGCTGCT GAGCCAGGTC
CTGACCCTGT TCACCACCCC GGTGATCTAT CTCTACTTCG ACCGCCTGGC CCGGCGCTGG
GCGGCCTGGC GCAAGCAGCG CGGGCTGGAC CTGAACACCG AGGCTGGGCT CGACGGGGAC
GCCGGGCGAT GA
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| Protein sequence | MNPSRPFILR PVATTLLMVA ILLSGLIAYR FLPISALPEV DYPTIQVVTL YPGASPEIMT
SSITAPLENQ LGQIPGLNEM SSSSSGGASV ITLQFSLQSN LDVAEQEVQA AINAAQSLLP
NDLPNQPVFS KVNPADAPIL TLAVMSDGMP LPQIQDLVDT RLAQKISQIS GVGLVSISGG
QRPAVRVRAN PTALAAAGLS LEDLRSTVTS NNLNGPKGSF DGPTRASTLD ANDQLRSADA
YRDLIIAYKN GSPLRIRDVA SVEDDAENVR LAAWANNLPA VVLNIQRQPG ANVIEVVDRI
KALLPQLQST LPGNLDVQVL TDRTTTIRAS VKDVQFELAL AVALVVMVTF LFLRNVYATL
IPSFAVPLSL IGTFGVMYLS GFSINNLTLM ALTIATGFVV DDAIVMVENI ARYLEQGDSP
LEAALKGSKQ IGFTIISLTF SLIAVLIPLL FMGDVAGRLF REFAITLAVA ILISGFVSLT
LTPMLSAKLL RHIDEDQQGR FARAAGRVID GLIAHYAKAL RVVLRHLPLT LLVAIATLAL
TALLYLAMPK GFFPVQDTGV IQGVAEAPQS ISFQAMSERQ RALAEVVLKD PAVASLSSYI
GVDGSNPTLN TGRLLINLKP HSERDVTASE VIQRLQPELD HLAGIKLYMQ PVQDLTIEDR
VARTQYQFTL QDADPDVLAE WVPKLVARLQ ELPQLADVAS DWQDKGLQAY LNIDRDTASR
LGVKLSDIDS VLYNAFGQRL ISTIFTQATQ YRVVLEVAPQ FQLGPQALEQ LYVPSSDGTQ
VRLSSLAKVE ERHTLLAINH IAQFPSATLS FNLAKGYSLG EAVEAIRGVE ASLELPLSMQ
GSFRGAALAF EASLSNTLLL ILASVVTMYI VLGILYESFI HPVTILSTLP SAGVGALLAL
MLAGQEIGIV AIIGIILLIG IVKKNAIMMI DFALDAERNE GKPPHEAIYQ ACLLRFRPIL
MTTMAALLGA LPLMLAGGAG AELRQPLGIT MVGGLLLSQV LTLFTTPVIY LYFDRLARRW
AAWRKQRGLD LNTEAGLDGD AGR
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