Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_2694 |
Symbol | |
ID | 5356278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 2706367 |
End bp | 2708106 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640811745 |
Product | hypothetical protein |
Protein accession | YP_001348054 |
Protein GI | 152989459 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0729] Outer membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGACTGA CTCAAGGATT GCTCCGGTTC CCGCTGACCG GGCTGCTGTG CCTGAGTACG GCCGCCTTCG CGGAGAGCCA GCTCAGCGTG CGTGTCACCC CCGCCAACAG TGCCCTGAAG GCCAACATCG AGGCCTACGT GGGTAGCCTG GGCGAGCGGG ACGAGGCGGC ATTGCAGCGT TTTCGCCGCA ACGCCGAGGC CCAGGCGGAA AAGGCCGCGC AGGCGCTCGG CTATTTCCAG GCGCAGGTCG ACAGCGAGGT CAAGGACGGC AAGCCGCCGA AGCTGACGCT CAAGGTCACG CCCGGCGAGC CGGTGCGCCT GCGCCAGGTG AATATCCAGG TGCTCGGCGA GGCCGCCAGC CTGGAGAGCT TCCGCTTGCC GTCGGGCAAG CAGCTGAAAC CGGGCGCGAA GCTGAACCAG GGCGTCTACG AGGACGCCAA GCGGCTGATC CAGAACCAGG CCTCGCGCTA CGGCTTCTTC CAGGGCCGCT TCACCACCCA GCGCCTGAGC ATCGATCCGC GCGCCGGCAT CGCCGATATC GATCTGGTCT ACGACAGCGG CCAGCGCTAC ACCTTCGGCA AGGTCCGCTT CGATGGCGAC TCCATCATCG ACGAAGAGCT GTTGCGGCGC ATGGTGCCAT TCAAGGCCGG CCAACCCTAC GACTCCGAAC TGATCGCCGA GCTCAACCAG AACCTGCAAT CCAGCGGCTA CTTCGAGGGC GTGCGGGTCG ACGCCGCACC GAGCCAGGCG CAGGCCGACG GCGCTCGCCA GGCGATTCCG GTAGCGGTTC GGCTGGATGC GCGCAAGCCC AGGACCATGG GTGTCGGCCT CGGATTCTCC ACCGACGTCG GCGCGCGCGC GCGGTTCAAC TGGACCCGCC ACTGGGTCAA CGCCGAAGGG CACAGCCTGG GCTTCGAGTC GGAAATTTCC GCGCCCCGGC AGAACGTCGG CGCCTGGTAC GAGATCCCCC TCGATCCACC GCTCACCGAC AAGCTGCGCT TTACCAGCGG CTACCAGTTC GAAGACCTGG TCGACACCGA GAGCAAGCTG CTGACCCTCG GCGGCGAATG GCACAGCAAG CGCCCCGATG GCTGGCAGCG GGTAGTCTCG CTGAACTGGA TGCGCGAGGA ATACAAGCTC GGCGATGATT CCGGCCTGAG CAGCTTCCTC ATGCCCGGGA TCGGCTACTC GATCCTGGAG ACCGACAACA AGGTCGACCC CAGCCATGGC TACCGCCTGC AATTCAACGT CAAGGGCGCG AAGGAGGGCT TCCTGGCCGA CGCCGACGTG GTGCACGTCG ACGCCATGGC CAAGGGCCTG ACCAGCTTCG CCGGCGGCCA TCGCCTGCTC GGCCGCCTGC AGGTAGGCGG GATCGCCACC AACGACTACA AGTCGATCCC GCCCTCGCTG CGCTTCTTCG CCGGCGGCGA CCAGAGCGTG CGCGGCTACG ACTACCGGAC GCTGTCGCCG GAGAACTCCG ATGGCGACAA GATCGGCGGC CGCTACATGA TCGCCGGCAG TGTCGAGTAT CAATATCCGC TGGCCGAGCG CTGGCGCCTG GCGACCTTCG TCGACCAGGG CAACGCCTTC AACTCGCTGG ACTTCCCCTC GATCAAGACC GGGGTCGGCT TCGGCGTGCG CTGGGTCTCG CCGGTCGGCC CGTTGCGCCT CGACCTGGCC CACGCGCTCG ACGACGACGG CGGTTTCCGC CTGCACTTCT CCATGGGGCC CGAACTGTGA
|
Protein sequence | MRLTQGLLRF PLTGLLCLST AAFAESQLSV RVTPANSALK ANIEAYVGSL GERDEAALQR FRRNAEAQAE KAAQALGYFQ AQVDSEVKDG KPPKLTLKVT PGEPVRLRQV NIQVLGEAAS LESFRLPSGK QLKPGAKLNQ GVYEDAKRLI QNQASRYGFF QGRFTTQRLS IDPRAGIADI DLVYDSGQRY TFGKVRFDGD SIIDEELLRR MVPFKAGQPY DSELIAELNQ NLQSSGYFEG VRVDAAPSQA QADGARQAIP VAVRLDARKP RTMGVGLGFS TDVGARARFN WTRHWVNAEG HSLGFESEIS APRQNVGAWY EIPLDPPLTD KLRFTSGYQF EDLVDTESKL LTLGGEWHSK RPDGWQRVVS LNWMREEYKL GDDSGLSSFL MPGIGYSILE TDNKVDPSHG YRLQFNVKGA KEGFLADADV VHVDAMAKGL TSFAGGHRLL GRLQVGGIAT NDYKSIPPSL RFFAGGDQSV RGYDYRTLSP ENSDGDKIGG RYMIAGSVEY QYPLAERWRL ATFVDQGNAF NSLDFPSIKT GVGFGVRWVS PVGPLRLDLA HALDDDGGFR LHFSMGPEL
|
| |