| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2664 |
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| Symbol | |
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| ID | 5353689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 2677893 |
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| End bp | 2679695 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640811715 |
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| Product | cyclic diguanylate phosphodiesterase/diguanylate cyclase |
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| Protein accession | YP_001348024 |
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| Protein GI | 152989173 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain
[COG2203] FOG: GAF domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGATGG GCGACATCGC AGTCACCCAG GACTCCAGCA TGACGACTCC TCCCTATCCC
GCCGACGAGC CCGCCAGACA GGCCTACGTC GACCAGCTCG GCCTGCTGGA GGAAGGTGTC
GACGAAGTGT TCGAAGCGAT CCTCGGCGCC GCCACCTGCT ATTTCCAGAC GCCCATCGCG
CTCATTTCCA TTCTCGATCA CCAGCGCCAG TGGTTTCGCG CGAGCATCGG CCTCGGTATC
CGCCAGACGC CACGACGGGA TTCGTTCTGC GCCTACGCGA TCCTCGGCAA GGGAGTGTTC
GAGGTGGCCG ACGCCCGCCT CGATCCGCGC TTCCGCGACA ACCCCTACGT GCTGGGCGAG
CCGGGCATCC GCTTCTACGC CGGAGCGCCG CTGACCACCA CCGACGGACT CAACCTCGGC
AGCCTCTGCG TCATCGACAG GGAACCCCGC GGACCGCTGT CCGCGCGGGA CATCGCCATG
CTCGAGCACT TCGCCGGGCT GGTCATGGCA CGCATCCATA CGCTGCGCTC GACCAACTAC
ATCGACGAAC CGACCGGCCT CTACAATCGG CTGCGCCTGC AGGAAGACGT TTCCCTGCGC
CTGCAGCGCG ACGGCGCGCT GACCGTCATC GCCGCCGACC TCCTGCCTCT CGCCCTGCTC
AATACGATCA TTCGTACGCT GGGCTATCCG TTTTCCAACG ACCTCATGCT CGCGGCGCGC
GATCGCATCC GCAGCGAGCT GCCGGACTGC ACCCTCTACA AGATCAGCCC GACCCGCTTC
GGCTTGCTGC TGCCGCGGCA GCAGCAGGAA CAATCCGAGC CGGTCTGTAT CCGCCTGCTG
GAGGCCTTCG AGAAACCCGT GGTCTGCCAC GGCATTCCGA TCAAGGCCAA TCCCGGCCTC
GGCGTGCTGC CACTCACCGC CGACCATCCC CACGGCGAGC AGGACTGGCT GCGCCTGGTG
GTCAGCGCGG CCGACGACGC CCGTGACCGC GGCGTCGGCT GGGCGCGCTA CAACCCGCCG
CTGGACCAGG CCCAGCAGCG CGCCTTCACC CTGCTGGCCT CGCTGTCCCA GGCTATCGGT
ACGGAGGAAG GGTTCCACCT GGCATACCAG CCGAAGATCG ACCTGGCGAC GGGCCAATGT
ACCGGCGTCG AGGCATTGCT GCGCTGGCGC CACCCGCAAC TCGGGCCGGT CAGCCCCGCC
GAGTTCGTTC CCCTGGCGGA AAAGACCGCG CTGATGCGCC CGTTGAGCGA CTGGGTGCTG
CGCCATGCGC TGGAGCAACT GGCTCTCTGG CACGGACGGA ACATCCCGCT CACGCTGGCG
ATCAACGTCT CGGCGGCGGA AATGGAAGAC AGCGGTTTCC TGGAGGAGAC CGTCAGGCTC
GCCAGGCATC ACGGGCTCGA CCTTTCGGCC ATCGAGCTGG AGTTCACCGA AAGCGTGCTC
ATTCGCGACG CCTCGGCGGT GAGGGCAGTC TTGCTGCGCG CCCGCGAACT GGGCATGGGC
ATCGCGGTGG ATGATTTCGG CACCGGCTAC AGCAACTGGA CCTACCTGCG CGACCTGCCG
GTCACCGCCA TCAAGCTCGA CCAGTCGTTC ACCCGCGACC TGGGCGACTC GCCGAAGGCG
CAGAGTGTCA CCCAGGCGGT GATCGGCCTG GCCAGCCAGT TGGGCTATCG GGTGATCGCC
GAGGGCATCG AGACCCCTGA AACCCTTCAT CTGCTGCAAG CCTGGGGTTG TCGCGAGGGT
CAGGGCTATC TCATCGCCCG GCCGATGCTG GCGGACCAGC TGGAAGACTG GCTGCAGCGT
TAG
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| Protein sequence | MSMGDIAVTQ DSSMTTPPYP ADEPARQAYV DQLGLLEEGV DEVFEAILGA ATCYFQTPIA
LISILDHQRQ WFRASIGLGI RQTPRRDSFC AYAILGKGVF EVADARLDPR FRDNPYVLGE
PGIRFYAGAP LTTTDGLNLG SLCVIDREPR GPLSARDIAM LEHFAGLVMA RIHTLRSTNY
IDEPTGLYNR LRLQEDVSLR LQRDGALTVI AADLLPLALL NTIIRTLGYP FSNDLMLAAR
DRIRSELPDC TLYKISPTRF GLLLPRQQQE QSEPVCIRLL EAFEKPVVCH GIPIKANPGL
GVLPLTADHP HGEQDWLRLV VSAADDARDR GVGWARYNPP LDQAQQRAFT LLASLSQAIG
TEEGFHLAYQ PKIDLATGQC TGVEALLRWR HPQLGPVSPA EFVPLAEKTA LMRPLSDWVL
RHALEQLALW HGRNIPLTLA INVSAAEMED SGFLEETVRL ARHHGLDLSA IELEFTESVL
IRDASAVRAV LLRARELGMG IAVDDFGTGY SNWTYLRDLP VTAIKLDQSF TRDLGDSPKA
QSVTQAVIGL ASQLGYRVIA EGIETPETLH LLQAWGCREG QGYLIARPML ADQLEDWLQR
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