| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2618 |
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| Symbol | |
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| ID | 5359439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 2638432 |
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| End bp | 2639376 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640811669 |
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| Product | putative HTH-type transcriptional regulator YafC |
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| Protein accession | YP_001347980 |
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| Protein GI | 152986420 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.811729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAAGC TCACAGCGAT GGCCACCTTC GGCGCGGTGG TAGAGGCCGG CAGCTTCACC
CGCGCCGCCG AACGACTGTC GATCCCCAAG GCGCGCGTCT CGCAGCGCAT TTCCGACCTG
GAACGCCACC TTGGCGCACG ACTGCTGCAA CGGACCACAC GCAGCCTCAA CCTGACCGAG
GACGGACGCG CCTATTACAG CAAGTGCGCT TCCATCCTCC AGCAGGTGGA TGAGCTGGAA
GCGACCCTCA GGGGTGGCCT GATCGAACCC CGCGGCAGCC TGCGGATCGA GGCCCTGGCC
TCGGTCGCCC GCTGGGTGCT CGCTCCCCGT CTGCACGAGT TCCAGCACCG CTACCCGCAA
CTGACGCTCA CGCTGTGCGC CAGCGACCGC GTCAGCCACC TGCTCGAAGA GGGTATCGAC
TGCGCGATCC GTGGCGGTAC GCTGCCGGAC TCCAGCCTGG TCGCACGCCA CGCCTGCGAC
GTGCGGCTGG GCCTGTATGC CGCGCCGGGC TACCTCGAGG ACACGGGCAG AGCACGGCAT
CCCCGGGAGT TGCGCGAACA TCGCCGGCTC TCCTGGTTCA CCGGCCAGCG CAACCCTTTC
GCCTGGAAAC TGGAGTCGAC CGACGGCTCC TTCGATCTCG GCGCAAGCCA AGGCCTGCGC
TTCGACGATC CCGACGTCGC CATCGCCTCC TGTCTCGCCG GCAGCGGCAT CTGTCCGGCG
GCCCCCTTCG CGGTGGAAAG CTGGGTGCGC GCTGGCGCGC TGGTGCCGGT CCTGCCGCAA
TGGAGCTTCG CGCCACGCCC CATCCACCTC GTCTACCCTG GCGACCGCCA CCTTTCCGCG
CGGGTACGCT GCTTCGTCGA CTGGGCCCTG GAGCTGATGC GCCAATCGCC GAGCCTGTCC
ATGAGCCCGC AGGAATTGGC CGGAAACACG GCGGGACGCG AATGA
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| Protein sequence | MDKLTAMATF GAVVEAGSFT RAAERLSIPK ARVSQRISDL ERHLGARLLQ RTTRSLNLTE
DGRAYYSKCA SILQQVDELE ATLRGGLIEP RGSLRIEALA SVARWVLAPR LHEFQHRYPQ
LTLTLCASDR VSHLLEEGID CAIRGGTLPD SSLVARHACD VRLGLYAAPG YLEDTGRARH
PRELREHRRL SWFTGQRNPF AWKLESTDGS FDLGASQGLR FDDPDVAIAS CLAGSGICPA
APFAVESWVR AGALVPVLPQ WSFAPRPIHL VYPGDRHLSA RVRCFVDWAL ELMRQSPSLS
MSPQELAGNT AGRE
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